| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1979270 | NA (NA) | 56 (1.040) | 23/128 | 0.3 | 41.8% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 3844020 | 78 (1.450) | coding (57/1767 nt) | adeD | adenine deaminase | |||||
AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979207‑1979270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAATTATTCATATTTTTC < NC_000913/3844020‑3843957 gaAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTTGCAGCATCACCT < 1:1696096/63‑1 GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTT < 1:1211877/65‑1 GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTT < 1:2727356/65‑1 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCT < 1:1099495/65‑1 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCT < 1:2973956/65‑1 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCT < 1:2367582/65‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTG > 1:957639/1‑65 ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGT < 1:3019580/65‑1 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATT > 1:2011870/1‑65 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTGGTATT > 1:2295313/1‑65 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCA < 1:616295/65‑1 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCA > 1:2115893/1‑65 AGCACCTCAAAAACACCATCATACACTAAATCAGGAAGTTGGCAGCATCACCTTCCTGGTATTCA < 1:2095897/65‑1 GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAG > 1:1822614/1‑65 GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAG > 1:1908456/1‑65 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCC > 1:521634/1‑65 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCG < 1:151578/65‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCG < 1:3915952/65‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCG < 1:3618829/65‑1 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAA > 1:2341996/1‑65 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAAT > 1:1211460/1‑65 AACACCATCATACACTAAATCAGTAAGTTGGCAACATCACCTTCCTGGTATTCAGCCCGGCTAAT > 1:1696565/1‑65 ATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAA < 1:3002600/65‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAA > 1:576598/1‑65 ATACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAA < 1:959770/65‑1 ACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATT > 1:1798440/1‑65 ACACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATT > 1:2118655/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCCGCCCGGCTAATGTGATGAAATTTA > 1:3330055/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGCAATTTA > 1:3320259/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTA > 1:4318697/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTA > 1:3137058/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTA > 1:3249124/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTA > 1:3579217/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTA > 1:467491/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTA > 1:257445/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTA > 1:2209565/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTA > 1:2194576/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTA > 1:803211/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTA > 1:936260/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTA > 1:1406631/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGAGATGAAATTTA > 1:63931/1‑65 TCAGTAAGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTA > 1:1451759/1‑65 AGTAAGTTGGCAGCATCAGCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAAT < 1:1755450/65‑1 AGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAA > 1:1184944/1‑65 AGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAA > 1:201214/1‑65 AGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAA > 1:1942650/1‑65 AGTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAA > 1:1648903/1‑65 GTTGGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAAT > 1:1373181/1‑65 GGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAATTAT < 1:3809686/65‑1 GGCAGCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAATTAT < 1:573531/65‑1 GCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAATTATTCAT > 1:3474374/1‑65 GCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAATTATTCAT > 1:2931621/1‑65 GCATCACCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAATTATTCAT > 1:2374219/1‑65 CCTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAATTATTCATATTTTT > 1:3928189/1‑65 CTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAATTATTCATATTTTTC > 1:4131883/1‑65 CTTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAATTATTCATATTTTTC > 1:2621813/1‑65 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979207‑1979270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCTGGTATTCAGCCCGGCTAATGTGATGAAATTTATGGTTAATAGAATTATTCATATTTTTC < NC_000913/3844020‑3843957 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |