New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1603798	33 (0.690)	10 (0.210)	7/128	2.0	23.0%	coding (780/1029 nt)	lsrC	Autoinducer‑2 ABC transporter membrane subunit LsrC
	?	NC_000913	1603802 =	34 (0.710)					coding (784/1029 nt)	lsrC	Autoinducer‑2 ABC transporter membrane subunit LsrC

GCAATTGCAGCCTGCGTGCTGGGCGGCATTAGTTTGCTCGGTGGTTCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1603748‑1603798 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCATTGGTGCGGTACTCGGCGCATGGTTCCTGACGCAGATCGATAGCGTACTGGTGCTGTTGC  >  NC_000913/1603802‑1603865                                                                                                                     GCAATTGCATCCTGGGTGCGGGGCGGCATTAGTTTGCTCGGTGGTCGCCGTATCATTGGTGCGGT                                                    <  1:660915/65‑1               CGTGCTGGGCGGCATTAGTTTGCTCGGTGGTCGCCGTATCATTAGTGCGGTACTCGGCGCATGGT                                      <  1:1525113/65‑1               CGTGCTGGGCGGCAGTGGTTTGCTCGGTGGTCGCCGTATCATTAGTGCGGTACTCGGCGCATGGT                                      <  1:215384/65‑1                           CATTAGTTTGCTCGGTGGTCGCCGTATCATTAGTGCGGTACTCGGCGCATGGTTCCTGACGCAGA                          <  1:474201/65‑1                                tTTTGCTCGGTGGTCGCCGTATCATTAGTGCGGTACTCGGCGCATGGTTCCTGACGCAGATCGAT                     <  1:413269/64‑1                                   TGCTCGGTGGTCGCCGTATCATTGGTGCGGTACTCGGCGCATGGTTCCTGACGCAGATCGATAGC                  <  1:2311863/65‑1                                   TGCTCGGTGGTCGCCGTATCATTAGTGCGGTACTCGGCGCATGGTTCCTGACGCAGATCGATAGC                  <  1:3265382/65‑1                                     CTCGGTGGTCGCCGTATCATTAGTGCGGTACTCGGCGCATGGTTCCTGACGCAGATCGATAGCGT                <  1:2479031/65‑1                                        GGTGGTCGCCGTATCATTAGTGCGGTACTCGGCGCATGGTTCCTGACGCAGATCGATAGCGTACT             <  1:2980798/65‑1                                                   TATCATTAGTGCGGTACTCGGCGCATGGTTCCTGACGCAGATCGATAGCGTACTGGTGCTGTTGC  <  1:2358243/65‑1                                                                                                                     GCAATTGCAGCCTGCGTGCTGGGCGGCATTAGTTTGCTCGGTGGTTCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1603748‑1603798 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCATTGGTGCGGTACTCGGCGCATGGTTCCTGACGCAGATCGATAGCGTACTGGTGCTGTTGC  >  NC_000913/1603802‑1603865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.