| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 246193 | 0 (0.000) | 56 (1.260) | 30/128 | 0.1 | 100% | coding (47/279 nt) | yafQ | ribosome‑dependent mRNA interferase toxin YafQ |
| ? | NC_000913 | 273955 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
TAAGAAGCGTCATAAGATATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/246131‑246193‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTT > NC_000913/273955‑274018 TAAGAAGCGTCATAAGATATTTCAATTTATACATATCCTTATGACGCTTTTGTGCAAGTTTTAGG > 1:379973/1‑65 AAGCGTCATAAGATATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGG < 1:1307056/65‑1 AGCGTCATAAGATATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAGGGT < 1:2000487/65‑1 AGCGTCATAAGATATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGT > 1:2982563/1‑65 AGCGTCATAAGATATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGT < 1:2982303/65‑1 AGCGTCATAAGATATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGT > 1:2051523/1‑65 AAGATATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAA > 1:2673943/1‑65 AGATATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAG > 1:2298599/1‑65 ATATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCG > 1:2158514/1‑65 ATATTTCAATTTATTCATATCCTTATCGCGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCG < 1:3051596/65‑1 ATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGG < 1:472741/65‑1 ATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGG < 1:3315792/65‑1 ATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGG < 1:2575570/65‑1 TCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAA > 1:999519/1‑65 AATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAAT < 1:2085418/65‑1 ATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATT > 1:389272/1‑65 TTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTC > 1:210998/1‑65 TTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTC > 1:807463/1‑65 agATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTACCAATAAGCGGGGAAATTCT < 1:2858999/63‑1 TTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCT < 1:1146902/65‑1 TTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCT < 1:949746/65‑1 CATATCCTGATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCG < 1:157096/65‑1 TCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTG > 1:2030141/1‑65 TCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTG > 1:793471/1‑65 TCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTG > 1:2179986/1‑65 TCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTG > 1:180241/1‑65 TCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTG > 1:3008463/1‑65 TCCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTG > 1:1713454/1‑65 CCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGA < 1:2629665/65‑1 CCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGA > 1:230659/1‑65 CCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGA < 1:1030873/65‑1 CCTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGA < 1:1957814/65‑1 CTTATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC < 1:400339/65‑1 TATGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTC > 1:171039/1‑65 TGACGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAG < 1:1609582/65‑1 CGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGCCTCAGTCA > 1:3204153/1‑65 CGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA > 1:2022413/1‑65 CGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA > 1:95860/1‑65 CGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA > 1:793576/1‑65 CGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA < 1:978888/65‑1 CGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA < 1:479598/65‑1 CGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA > 1:3217846/1‑65 CGCTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA > 1:1957687/1‑65 CGCTTTTGTGCAAGTTTTAGGAAGGGGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA > 1:1411093/1‑65 CTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATT < 1:3355470/65‑1 CTTTTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATT > 1:2999962/1‑65 TTGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA < 1:3474111/65‑1 TGTGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCAT > 1:2314044/1‑65 TGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTT < 1:1076190/65‑1 TGCAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTT < 1:3085149/65‑1 CAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCT < 1:567535/65‑1 CAAGTTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCT < 1:1446121/65‑1 CAAGTTTTACGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCT < 1:380880/65‑1 TTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT > 1:860079/1‑65 TTTTAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT > 1:2327630/1‑65 AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTT > 1:1868746/1‑65 TAAGAAGCGTCATAAGATATTTCAATTTATTCATATCCTTATGACGCTTTTGTGCAAGTTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/246131‑246193‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTT > NC_000913/273955‑274018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |