Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 3,802,682 IS1 (–) +9 bp 100% coding (369‑377/1020 nt) waaO ← UDP‑D‑glucose:(glucosyl)LPS alpha‑1,3‑glucosyltransferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1978503 =NA (NA)112 (1.260) 79/176 NT 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 3802690 0 (0.000)coding (369/1020 nt) waaO UDP‑D‑glucose:(glucosyl)LPS alpha‑1,3‑glucosyltransferase
* ? NC_000913 = 1979270NA (NA)86 (0.970) 57/176 NT 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 3802682 = 0 (0.000)coding (377/1020 nt) waaO UDP‑D‑glucose:(glucosyl)LPS alpha‑1,3‑glucosyltransferase

TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979176‑1979270
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCAC  >  NC_000913/3802682‑3802778
                                                                                                                                                                                                
TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAG                                                                                               <  1:2203143/99‑1
 AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGG                                                                                              <  1:558701/99‑1
  GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGC                                                                                             >  2:285701/1‑99
      AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCT                                                                                         <  1:529256/99‑1
      AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCT                                                                                         <  1:1731196/99‑1
        CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTA                                                                                       <  2:806420/99‑1
         AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTAT                                                                                      >  1:917508/1‑99
          GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATT                                                                                     >  2:2160015/1‑99
             GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAAT                                                                                  >  1:321889/1‑99
             GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAAT                                                                                  >  2:321799/1‑99
              GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATA                                                                                 >  1:1326084/1‑99
              GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATA                                                                                 <  2:1628139/99‑1
              GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATA                                                                                 >  2:1299964/1‑99
              GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCACCTTATTAATA                                                                                 <  2:1178497/99‑1
                 CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAG                                                                              <  2:1993856/99‑1
                 CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAG                                                                              <  1:208544/99‑1
                   GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTA                                                                            >  1:1489458/1‑99
                   GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTA                                                                            >  2:1621179/1‑99
                   GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTA                                                                            >  2:1582273/1‑99
                    CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAGACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAA                                                                           <  1:598736/99‑1
                    CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAA                                                                           <  1:1497187/99‑1
                     TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAAT                                                                          <  2:421719/99‑1
                     TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAAT                                                                          <  2:1448354/99‑1
                     TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAAT                                                                          >  2:600811/1‑99
                      GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATC                                                                         <  2:1859696/99‑1
                       ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCT                                                                        <  1:797948/99‑1
                        TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTG                                                                       >  2:1435574/1‑99
                          GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCA                                                                     >  2:1024115/1‑99
                           AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAA                                                                    <  1:1486241/99‑1
                              CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAA                                                                 <  2:881084/99‑1
                                GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACA                                                               <  2:525932/99‑1
                                   GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAA                                                            <  2:236277/99‑1
                                   GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAA                                                            >  1:69821/1‑99
                                       CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAA                                                        <  1:2256291/99‑1
                                       CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAA                                                        >  2:846801/1‑99
                                        TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAA                                                       <  1:2341467/99‑1
                                           AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATA                                                    >  1:1255626/1‑99
                                              ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATAT                                                 <  2:433789/99‑1
                                              ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATAT                                                 >  1:1954350/1‑99
                                              ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATAT                                                 <  2:91486/99‑1
                                                CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTG                                               >  2:416647/1‑99
                                                  CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCA                                             <  2:1793356/99‑1
                                                  CAAAAACACCATCATACACTAAATCAGCAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCA                                             <  2:1288783/99‑1
                                                   AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCAT                                            <  1:857472/99‑1
                                                    AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATG                                           >  1:919144/1‑99
                                                      AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAG                                         >  2:1515879/1‑99
                                                      AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAG                                         >  2:358435/1‑99
                                                      AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAG                                         >  2:2181505/1‑99
                                                      AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAG                                         >  1:2119133/1‑99
                                                      AACACCATCATACACTAAATCAGTAAGTTGGCAGCACCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAG                                         >  2:1084450/1‑99
                                                       ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGT                                        <  2:359890/99‑1
                                                         ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCC                                      <  2:1200567/99‑1
                                                         ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCC                                      <  2:633527/99‑1
                                                            ATCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAAT                                   <  2:1141656/99‑1
                                                             TCATACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATT                                  <  2:520682/99‑1
                                                                TACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTT                               >  2:533778/1‑99
                                                                TACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTT                               >  2:1840230/1‑99
                                                                TACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTT                               >  1:189043/1‑99
                                                                TACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTT                               >  2:2112126/1‑99
                                                                 ACACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTA                              >  1:1126811/1‑99
                                                                  CACTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAG                             >  1:1022482/1‑99
                                                                    CTAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTG                           >  1:218020/1‑99
                                                                     TAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGC                          >  2:1714496/1‑99
                                                                     TAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGC                          <  2:1766158/99‑1
                                                                     TAAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGC                          >  2:856871/1‑99
                                                                      AAATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCT                         <  2:927703/99‑1
                                                                        ATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAG                       <  1:1187428/99‑1
                                                                        ATCAGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAG                       <  1:844204/99‑1
                                                                           AGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCA                    <  2:255624/99‑1
                                                                           AGTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCA                    <  1:1678548/99‑1
                                                                            GTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAA                   <  1:1032159/99‑1
                                                                            GTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAA                   >  2:2220849/1‑99
                                                                            GTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAA                   >  1:1312846/1‑99
                                                                            GTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAA                   <  1:20350/99‑1
                                                                            GTAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAA                   <  2:1735419/99‑1
                                                                             TAAGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAAT                  <  1:1151298/99‑1
                                                                               AGTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGA                <  2:662109/99‑1
                                                                                GTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAG               <  1:2293205/99‑1
                                                                                GTTGGCAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAG               >  2:1672154/1‑99
                                                                                 TTGGCAGCATCACCTTAAGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGC              >  2:51046/1‑99
                                                                                     CAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAG          <  1:806227/99‑1
                                                                                     CAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAG          <  2:1653377/99‑1
                                                                                     CAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAG          <  1:1526643/99‑1
                                                                                     CAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAG          <  2:204165/99‑1
                                                                                     CAGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAG          <  2:2132451/99‑1
                                                                                      AGCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGT         >  1:149371/1‑99
                                                                                       GCATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATACTAAGTGCTAGGCAATGAGCGCAGTC        >  2:110124/1‑99
                                                                                         ATCACCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGA      <  1:897879/99‑1
                                                                                             CCTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCAC  >  2:1145266/1‑99
                                                                                                                                                                                                
TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979176‑1979270
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCAC  >  NC_000913/3802682‑3802778

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.