| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 3,802,682 | IS1 (–) +9 bp | 100% | coding (369‑377/1020 nt) | waaO ← | UDP‑D‑glucose:(glucosyl)LPS alpha‑1,3‑glucosyltransferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 112 (1.260) | 79/176 | NT | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 3802690 | 0 (0.000) | coding (369/1020 nt) | waaO | UDP‑D‑glucose:(glucosyl)LPS alpha‑1,3‑glucosyltransferase | |||||
| * | ? | NC_000913 | = 1979270 | NA (NA) | 86 (0.970) | 57/176 | NT | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 3802682 = | 0 (0.000) | coding (377/1020 nt) | waaO | UDP‑D‑glucose:(glucosyl)LPS alpha‑1,3‑glucosyltransferase | |||||
Only 100 of 213 total aligned reads displayed.
ACCATTGCGACTTTATCGTCAGGAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAG > NC_000913/3802592‑3802788 | aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCt < 1:529256‑M2/10‑1 (MQ=255) aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCt < 1:1731196‑M2/10‑1 (MQ=255) cATTGCGACTTTATCGTCAGGAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCgg > 1:857550‑M2/1‑97 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCtta < 2:806420‑M2/12‑1 (MQ=255) aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCttat > 1:917508‑M2/87‑99 (MQ=255) gCGACTTTATCGTCAGGAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaat > 2:1501920‑M2/1‑93 (MQ=255) cGACTTTATCGTCAGGAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatg < 2:1758407‑M2/99‑8 (MQ=255) gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATtaat > 1:321889‑M2/83‑99 (MQ=255) gACTTTATCGTCAGGAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatga > 1:2019208‑M2/1‑91 (MQ=255) aCTTTATCGTCAGGAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgac < 1:1012040‑M2/99‑10 (MQ=255) cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAg < 1:208544‑M2/21‑1 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTa > 2:1621179‑M2/77‑99 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTa > 2:1582273‑M2/77‑99 (MQ=255) tCGTCAGGAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaac < 2:197967‑M2/99‑16 (MQ=255) tCGTCAGGAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaac < 2:588420‑M2/99‑16 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAAt > 2:600811‑M2/75‑99 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAAt < 2:1448354‑M2/25‑1 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAAt < 2:421719‑M2/25‑1 (MQ=255) gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATc < 2:1859696‑M2/26‑1 (MQ=255) gTCAGGAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaactt < 2:529256‑M2/99‑18 (MQ=255) tCAGGAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaactta > 1:1686730‑M2/1‑81 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCt < 1:797948‑M2/27‑1 (MQ=255) cAGGAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttat > 1:60415‑M2/1‑80 (MQ=255) gAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattga > 1:134575‑M2/1‑77 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCaa < 1:1486241‑M2/31‑1 (MQ=255) aaaTGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgat < 1:1945042‑M2/99‑24 (MQ=255) aaaTGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgat < 2:1628918‑M2/99‑24 (MQ=255) aTGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatag < 2:1045950‑M2/99‑26 (MQ=255) tGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagt < 1:980568‑M2/99‑27 (MQ=255) gagaAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtg > 2:2262017‑M2/1‑72 (MQ=255) agaAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgt > 1:1985974‑M2/1‑71 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACaaaa > 1:69821‑M2/61‑99 (MQ=255) aattaattAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaactcattgatagtgtttt < 2:436228‑M2/99‑32 (MQ=255) attaattaGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgtttta < 2:1671016‑M2/99‑33 (MQ=255) attaattaGTGGCTCAAGAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactctaacttatcgatagtgtttta > 2:111514‑M2/1‑67 (MQ=255) ttaattaGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttat > 1:1194568‑M2/1‑66 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGaa < 1:2256291‑M2/43‑1 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGaa > 2:846801‑M2/57‑99 (MQ=255) attaGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgtt > 2:2233217‑M2/1‑63 (MQ=255) ttaGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttc < 1:1505467‑M2/99‑38 (MQ=255) taGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttca > 1:1354260‑M2/1‑61 (MQ=255) taGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttca > 2:506303‑M2/1‑61 (MQ=255) agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAata > 1:1255626‑M2/53‑99 (MQ=255) tCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatg < 2:1700692‑M2/99‑46 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCa < 2:1793356‑M2/54‑1 (MQ=255) caaaaacaccatcatacactaaatcagcaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCa < 2:1288783‑M2/54‑1 (MQ=255) aTAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgccc > 2:972683‑M2/1‑51 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAg > 1:2119133‑M2/42‑99 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcaccaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAg > 2:1084450‑M2/42‑99 (MQ=255) acaccatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGt < 2:359890‑M2/59‑1 (MQ=255) aGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccga > 2:346895‑M2/1‑49 (MQ=255) gTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat < 1:816422‑M2/99‑52 (MQ=255) tCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg < 2:474903‑M2/99‑53 (MQ=255) accatcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTcc < 2:1200567‑M2/61‑1 (MQ=255) ccccTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga > 1:1676010‑M2/1‑46 (MQ=255) ccccTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga > 1:75605‑M2/1‑46 (MQ=255) cccTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac < 2:389147‑M2/99‑55 (MQ=255) ccTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact > 1:2355916‑M2/1‑44 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAAt < 2:1141656‑M2/64‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAAtt < 2:520682‑M2/65‑1 (MQ=255) cTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt > 2:883652‑M2/1‑43 (MQ=255) gACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg > 1:1334665‑M2/1‑41 (MQ=255) tacactaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCtt > 2:2112126‑M2/32‑99 (MQ=255) aCAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt < 2:242316‑M2/99‑60 (MQ=255) aCAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt < 1:1606253‑M2/99‑60 (MQ=255) aCAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt < 2:557972‑M2/99‑60 (MQ=255) aaaTGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca > 1:340240‑M2/1‑38 (MQ=255) aaTGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat < 1:1124730‑M2/99‑63 (MQ=255) ctaaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTg > 1:218020‑M2/28‑99 (MQ=255) aTGATATCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg < 1:1845254‑M2/99‑64 (MQ=255) taaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGc > 2:856871‑M2/27‑99 (MQ=255) aaatcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCt < 2:927703‑M2/74‑1 (MQ=255) atatCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag > 2:2175633‑M2/1‑33 (MQ=255) tatCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc < 1:2249596‑M2/99‑68 (MQ=255) atcagtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAg < 1:844204‑M2/76‑1 (MQ=255) atCTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagct < 2:2203143‑M2/99‑69 (MQ=255) cTGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc < 1:1805786‑M2/99‑71 (MQ=255) tGCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatactgttttatgttcagataatgcccgatgactttgtcatgcagctcca < 2:779839‑M2/99‑72 (MQ=255) gtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCaa > 1:1312846‑M2/20‑99 (MQ=255) gtaagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCaa < 1:1032159‑M2/80‑1 (MQ=255) taagttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAAt < 1:1151298‑M2/81‑1 (MQ=255) gCATCCAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac > 2:1453260‑M2/1‑27 (MQ=255) agttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGa < 2:662109‑M2/83‑1 (MQ=255) gttggcagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAg < 1:2293205‑M2/84‑1 (MQ=255) cAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt < 1:1562260‑M2/99‑78 (MQ=255) cAGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt < 2:2067750‑M2/99‑78 (MQ=255) aGATAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt < 2:74048‑M2/99‑79 (MQ=255) cagcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAg < 2:2132451‑M2/89‑1 (MQ=255) tAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga < 2:2006061‑M2/99‑82 (MQ=255) tAAAGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga > 1:436484‑M2/1‑18 (MQ=255) agcatcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGt > 1:149371‑M2/10‑99 (MQ=255) aaGGACTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaga > 1:1520054‑M2/1‑16 (MQ=255) atcaccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGa < 1:897879‑M2/93‑1 (MQ=255) aCTTTAGGCGCCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacga > 1:206073‑M2/1‑12 (MQ=255) ccTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCAc > 2:1145266‑M2/3‑99 (MQ=255) gcgcCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgac > 1:637818‑M2/1‑5 (MQ=255) ccggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc < 2:1222737‑M2/99‑98 (MQ=255) cggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc > 2:1715977‑M2/1‑1 (MQ=255) cggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc < 2:1325920‑M2/99‑99 (MQ=255) cggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc < 2:30833‑M2/99‑99 (MQ=255) | ACCATTGCGACTTTATCGTCAGGAAATGAGAAATTAATTAGTGGCTCAATAGTCCCCTGACAAATGATATCTGCATCCAGATAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAG > NC_000913/3802592‑3802788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |