mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 5 (0.040) | 5/176 | NT | 3.4% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 4541967 = | 143 (1.200) | intergenic (+408/‑70) | fimB/fimE | regulator for fimA/regulator for fimA | |||||
| * | ? | NC_000913 | 3652036 = | NA (NA) | 5 (0.040) | 5/176 | NT | 4.1% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 4542311 | 116 (0.970) | coding (275/597 nt) | fimE | regulator for fimA | |||||
| * | ? | NC_000913 | = 3584195 | NA (NA) | 3 (0.030) | 3/172 | NT | 2.5% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4542584 | 104 (0.980) | coding (548/597 nt) | fimE | regulator for fimA | |||||
| * | ? | NC_000913 | = 3584195 | NA (NA) | 6 (0.050) | 6/176 | NT | 4.9% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 4542512 = | 105 (0.980) | coding (476/597 nt) | fimE | regulator for fimA | |||||
| * | ? | NC_000913 | 3583428 = | NA (NA) | 3 (0.030) | 3/176 | NT | 2.5% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4542520 | 105 (0.980) | coding (484/597 nt) | fimE | regulator for fimA | |||||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 4 (0.030) | 4/176 | NT | 3.0% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4542256 | 130 (1.090) | coding (220/597 nt) | fimE | regulator for fimA | |||||