Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 3,899,395 IS1 (–) +9 bp 100% intergenic (‑2/+5) yieK ← / ← yieL putative glucosamine‑6‑phosphate deaminase YieK/putative hydrolase YieL

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1979270NA (NA)99 (1.070) 65/174 NT 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 3899395 = 0 (0.000)intergenic (‑2/+13) yieK/yieL putative glucosamine‑6‑phosphate deaminase YieK/putative hydrolase YieL
* ? NC_000913 = 3584195NA (NA)111 (1.190) 76/176 NT 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 3899403 0 (0.000)intergenic (‑10/+5) yieK/yieL putative glucosamine‑6‑phosphate deaminase YieK/putative hydrolase YieL

Only 100 of 243 total aligned reads displayed.

CCAGGTTAACACGACGCGTCTTCGACATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTAAT  >  NC_000913/3899297‑3899493
                                                                                                  |                                                                                                  
cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacct                                                                                                    <  2:2433520‑M2/1‑1 (MQ=255)
 agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacctt                                                                                                   <  2:832449‑M2/2‑1 (MQ=255)
   tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTaa                                                                                                 <  1:604175‑M2/4‑1 (MQ=255)
     ttAACACGACGCGTCTTCGACATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATg                                                                                               <  1:1978754/99‑1 (MQ=255)
     ttAACACGACGCGTCTTCGACATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATg                                                                                               >  2:2327836/1‑99 (MQ=255)
        gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCt                                                                                            <  2:706482‑M2/9‑1 (MQ=255)
         cacGACGCGTCTTCGACATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTg                                                                                           >  2:1545956‑M2/1‑98 (MQ=255)
           cgacgCGTCTTCGACATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggt                                                                                         <  2:1294850‑M2/99‑4 (MQ=255)
             acgCGTCTTCGACATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaa                                                                                       <  1:1178637‑M2/99‑6 (MQ=255)
             acgCGTCTTCGACATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaa                                                                                       >  2:1740633‑M2/1‑94 (MQ=255)
                 gTCTTCGACATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgac                                                                                   <  1:1600932‑M2/99‑10 (MQ=255)
                  gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTtattttattt                                                                                  >  2:109083‑M2/81‑99 (MQ=255)
                    ttCGACATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactcc                                                                                <  1:2395446‑M2/99‑13 (MQ=255)
                      gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAaat                                                                              <  2:451238‑M2/23‑1 (MQ=255)
                      cGACATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaa                                                                              >  2:2036657‑M2/1‑85 (MQ=255)
                       gACATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaac                                                                             <  2:1228522‑M2/99‑16 (MQ=255)
                       ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAaata                                                                             <  1:453479‑M2/24‑1 (MQ=255)
                        aCATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaact                                                                            >  2:2141813‑M2/1‑83 (MQ=255)
                        aCATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaact                                                                            >  1:1235377‑M2/1‑83 (MQ=255)
                        aCATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaact                                                                            >  1:2190271‑M2/1‑83 (MQ=255)
                        aCATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaact                                                                            >  1:2030288‑M2/1‑83 (MQ=255)
                         gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAaataat                                                                           <  1:1429646‑M2/26‑1 (MQ=255)
                         cATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaactt                                                                           <  2:2204603‑M2/99‑18 (MQ=255)
                          atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAAtt                                                                          >  2:2046985‑M2/73‑99 (MQ=255)
                          atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAAtt                                                                          <  2:1250079‑M2/27‑1 (MQ=255)
                          atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAAtt                                                                          <  2:939390‑M2/27‑1 (MQ=255)
                           tataACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttat                                                                         >  1:1382832‑M2/1‑80 (MQ=255)
                           tataACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttat                                                                         <  1:1927863‑M2/99‑20 (MQ=255)
                             gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCt                                                                       >  1:698750‑M2/70‑99 (MQ=255)
                              aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTg                                                                      >  2:1862612‑M2/69‑99 (MQ=255)
                                acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTa                                                                    <  2:777825‑M2/33‑1 (MQ=255)
                                  agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACa                                                                  <  2:1806341‑M2/35‑1 (MQ=255)
                                  aaGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagt                                                                  <  2:1485230‑M2/99‑27 (MQ=255)
                                    aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACaaa                                                                <  1:1742064‑M2/37‑1 (MQ=255)
                                      gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAgg                                                              <  2:145031‑M2/39‑1 (MQ=255)
                                      gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAgg                                                              <  2:1263999‑M2/39‑1 (MQ=255)
                                      gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAgg                                                              >  1:895587‑M2/61‑99 (MQ=255)
                                      gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAgg                                                              <  1:437687‑M2/39‑1 (MQ=255)
                                         tGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttat                                                           <  2:2159266‑M2/99‑34 (MQ=255)
                                           tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCa                                                         <  1:520737‑M2/44‑1 (MQ=255)
                                           gtgtGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgt                                                         >  2:1958989‑M2/1‑64 (MQ=255)
                                            tgtgCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgtt                                                        >  2:649442‑M2/1‑63 (MQ=255)
                                             gtgCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttc                                                       <  2:1830226‑M2/99‑38 (MQ=255)
                                             gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATa                                                       <  2:854767‑M2/46‑1 (MQ=255)
                                              tgCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttca                                                      <  2:2362538‑M2/99‑39 (MQ=255)
                                               gcacctcaaaaacaccctcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAgg                                                     <  2:2269896‑M2/48‑1 (MQ=255)
                                               gcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAgg                                                     >  2:325588‑M2/52‑99 (MQ=255)
                                               gCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcag                                                     <  1:1826771‑M2/99‑40 (MQ=255)
                                                ccGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcaga                                                    <  2:2333569‑M2/99‑41 (MQ=255)
                                                  cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTg                                                  >  1:2056496‑M2/49‑99 (MQ=255)
                                                     acacGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatg                                               <  1:2115556‑M2/99‑46 (MQ=255)
                                                      cacGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgc                                              >  2:736761‑M2/1‑53 (MQ=255)
                                                      cacGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgc                                              >  1:792305‑M2/1‑53 (MQ=255)
                                                       aaaacaccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGc                                             >  1:2357215‑M2/44‑99 (MQ=255)
                                                             ccatcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACa                                       >  1:694684‑M2/38‑99 (MQ=255)
                                                             cATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga                                       >  1:1128394‑M2/1‑46 (MQ=255)
                                                             cATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga                                       <  2:1704270‑M2/99‑54 (MQ=255)
                                                              catcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACAt                                      <  1:186598‑M2/63‑1 (MQ=255)
                                                               atcatacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATc                                     <  2:2075052‑M2/64‑1 (MQ=255)
                                                                ttCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt                                    >  1:1249041‑M2/1‑43 (MQ=255)
                                                                  ccTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                  >  2:268119‑M2/1‑41 (MQ=255)
                                                                  atacactaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCAt                                  >  2:1570847‑M2/33‑99 (MQ=255)
                                                                     ggTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                               >  1:1475861‑M2/1‑38 (MQ=255)
                                                                      gTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                              <  2:564381‑M2/99‑63 (MQ=255)
                                                                      gTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                              <  1:98500‑M2/99‑63 (MQ=255)
                                                                      actaaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCa                              <  2:599621‑M2/71‑1 (MQ=255)
                                                                        taaatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATg                            >  2:1115421‑M2/27‑99 (MQ=255)
                                                                          tCTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag                          <  1:938107‑M2/99‑67 (MQ=255)
                                                                          aatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGt                          >  2:80580‑M2/25‑99 (MQ=255)
                                                                          aatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGt                          <  2:19962‑M2/75‑1 (MQ=255)
                                                                          aatcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGt                          >  1:351689‑M2/25‑99 (MQ=255)
                                                                           cTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                         <  2:340348‑M2/99‑68 (MQ=255)
                                                                           cTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                         >  2:1178637‑M2/1‑32 (MQ=255)
                                                                           cTTCGGTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                         <  1:684712‑M2/99‑68 (MQ=255)
                                                                            tcagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTc                        <  1:1153640‑M2/77‑1 (MQ=255)
                                                                             cagtaagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCa                       <  1:1339426‑M2/78‑1 (MQ=255)
                                                                               ggTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca                     <  1:1767881‑M2/99‑72 (MQ=255)
                                                                               ggTAATGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca                     <  2:908185‑M2/99‑72 (MQ=255)
                                                                                 aagttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGAcc                   <  1:303314‑M2/82‑1 (MQ=255)
                                                                                   gttggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCg                 <  2:1022022‑M2/84‑1 (MQ=255)
                                                                                    tGATTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                >  2:399754‑M2/1‑23 (MQ=255)
                                                                                     tggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGa               <  2:152950‑M2/86‑1 (MQ=255)
                                                                                     tggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGa               <  1:2401500‑M2/86‑1 (MQ=255)
                                                                                     tggcagcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGa               <  1:2131052‑M2/86‑1 (MQ=255)
                                                                                      aTTAATTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt              <  1:1782873‑M2/99‑79 (MQ=255)
                                                                                         agcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATAtt           <  1:1068791‑M2/90‑1 (MQ=255)
                                                                                         agcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATAtt           <  1:2252954‑M2/90‑1 (MQ=255)
                                                                                         aaTTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga           >  2:1627304‑M2/1‑18 (MQ=255)
                                                                                          gcatcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTc          >  1:1538449‑M2/9‑99 (MQ=255)
                                                                                          aTTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgag          <  2:366366‑M2/99‑83 (MQ=255)
                                                                                          aTTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgag          >  2:478849‑M2/1‑17 (MQ=255)
                                                                                          aTTTCATCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgag          <  2:1387082‑M2/99‑83 (MQ=255)
                                                                                           catcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTcc         <  2:1672906‑M2/92‑1 (MQ=255)
                                                                                             tcaccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTg       <  1:1661329‑M2/94‑1 (MQ=255)
                                                                                              caccTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTgg      >  2:484283‑M2/5‑99 (MQ=255)
                                                                                               aTCTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacga     <  1:1716478‑M2/99‑88 (MQ=255)
                                                                                                 cTTAATGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca   <  2:302147‑M2/99‑90 (MQ=255)
                                                                                                 cTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTaa   <  1:1002663‑M2/98‑1 (MQ=255)
                                                                                                  ttAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTAAt  <  2:2452000/99‑1 (MQ=255)
                                                                                                  ttAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTAAt  >  2:1193983/1‑99 (MQ=255)
                                                                                                  |                                                                                                  
CCAGGTTAACACGACGCGTCTTCGACATATAACCAAGCAGATGGTGTGCCGCGACACGGCTCATTTCCTGGTAATCTTCGGTAATGATTAATTTCATCTTAATGCCTTATTTTATTTAAATAATTTCTGTACAAAGGCTGCATAGGCTGGTCGCCAGACATCCATTTCATGGTTCAGACCCGGATATTCCTGGTAAT  >  NC_000913/3899297‑3899493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.