Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 252,159 IS1 (+) +9 bp 100% coding (155‑163/294 nt) yafN → antitoxin YafN

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 19796 =NA (NA)109 (1.000) 66/176 NT 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 252159 = 0 (0.000)coding (155/294 nt) yafN antitoxin YafN
* ? NC_000913 = 2521670 (0.000)92 (0.850) 63/176 NT 100% coding (163/294 nt) yafN antitoxin YafN
?NC_000913 = 258675 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 107 total aligned reads displayed.

CTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/252070‑252167
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG  <  NC_000913/258675‑258578
                                                                                                                                                                                                    
CTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGG                                                                                                   >  1:2802796/1‑99
CTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGG                                                                                                   >  2:272104/1‑99
    ATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGA                                                                                               <  1:958088/99‑1
    ATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGA                                                                                               <  1:2655299/99‑1
    ATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGA                                                                                               <  1:343784/99‑1
    ATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGA                                                                                               <  1:494459/99‑1
    ATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGA                                                                                               >  1:646579/1‑99
    ATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGA                                                                                               <  2:607487/99‑1
     TTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGAT                                                                                              >  2:1761442/1‑99
     TTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGAT                                                                                              >  2:1455315/1‑99
      TGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACGTGCTTGCTGGGTGATG                                                                                             <  2:1826045/99‑1
      TGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATG                                                                                             <  2:678732/99‑1
        ATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCT                                                                                           <  2:1204970/99‑1
         TCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTG                                                                                          >  2:679744/1‑99
         TCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTG                                                                                          >  1:425263/1‑99
         TCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTG                                                                                          >  1:2207310/1‑99
         TCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTG                                                                                          >  1:506775/1‑99
          CAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGC                                                                                         >  1:1658864/1‑99
           AACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCC                                                                                        >  2:1058846/1‑99
             CCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAA                                                                                      >  1:1043400/1‑99
             CCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAA                                                                                      <  2:3003704/99‑1
              CGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAAC                                                                                     <  1:506984/99‑1
              CGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAAC                                                                                     <  1:532444/99‑1
              CGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAAC                                                                                     <  1:605980/99‑1
              CGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAAC                                                                                     <  1:2961194/99‑1
                GTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTT                                                                                   >  2:724937/1‑99
                 TTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTA                                                                                  >  1:1610511/1‑99
                 TTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTA                                                                                  >  1:355157/1‑99
                 TTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTA                                                                                  >  2:301021/1‑99
                      GTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGAT                                                                             >  1:703297/1‑99
                       TTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATT                                                                            >  2:2065467/1‑99
                       TTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATT                                                                            <  1:976656/99‑1
                        TCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTT                                                                           <  1:746402/99‑1
                         CTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTA                                                                          <  2:2035139/99‑1
                          TTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAG                                                                         <  2:2841765/99‑1
                           TTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGT                                                                        <  1:1821445/99‑1
                              TAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTA                                                                     >  2:2647348/1‑99
                                 TAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGA                                                                  >  1:1352705/1‑99
                                 TAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGA                                                                  <  2:2654218/99‑1
                                 TAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGA                                                                  >  2:2358179/1‑99
                                 TAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGA                                                                  >  1:966843/1‑99
                                   ATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                >  1:1527825/1‑99
                                   ATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                >  1:2509244/1‑99
                                    TCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG                                                               <  2:1858656/99‑1
                                    TCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG                                                               <  2:70444/99‑1
                                      GCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTG                                                             >  2:542/1‑99
                                       CCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGT                                                            >  2:1208465/1‑99
                                       CCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTCAGTGTATGATGGTGT                                                            >  1:1031429/1‑99
                                         CCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT                                                          <  2:370286/99‑1
                                         CCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT                                                          <  1:835999/99‑1
                                         CCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT                                                          <  1:14763/99‑1
                                         CCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT                                                          >  1:384572/1‑99
                                          CGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTT                                                         <  1:2577708/99‑1
                                          CGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTT                                                         <  1:2375677/99‑1
                                          CGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTT                                                         <  2:1219895/99‑1
                                            CAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTG                                                       >  2:2991454/1‑99
                                              GGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                                     <  1:1874893/99‑1
                                               GATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                    <  1:2873033/99‑1
                                                ATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT                                                   >  2:126843/1‑99
                                                 TATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG                                                  <  2:2566038/99‑1
                                                 TATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG                                                  >  2:1640966/1‑99
                                                  ATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGC                                                 <  1:1349539/99‑1
                                                  ATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGC                                                 <  2:2021890/99‑1
                                                   TCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCT                                                >  1:1167154/1‑99
                                                      CTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA                                             <  1:2753632/99‑1
                                                       TTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG                                            >  2:1687281/1‑99
                                                        TAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT                                           <  2:395435/99‑1
                                                            TGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT                                       <  1:1418287/99‑1
                                                                 GCGCATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT                                  <  1:2157298/99‑1
                                                                    CATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTC                               <  2:3012738/99‑1
                                                                    CATTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTC                               <  1:1830144/99‑1
                                                                      TTCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTA                             >  1:2387550/1‑99
                                                                       TCGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT                            <  2:440765/99‑1
                                                                        CGAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATC                           <  1:476004/99‑1
                                                                         GAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA                          <  2:1635876/99‑1
                                                                         GAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA                          >  2:2300728/1‑99
                                                                         GAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA                          >  1:213916/1‑99
                                                                         GAAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACGGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA                          >  1:2377172/1‑99
                                                                          AAGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG                         >  2:2377117/1‑99
                                                                           AGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGC                        >  1:1549825/1‑99
                                                                           AGCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGC                        <  1:211810/99‑1
                                                                            GCGTTAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCT                       >  1:2459281/1‑99
                                                                                TAATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCC                   >  1:2688583/1‑99
                                                                                 AATGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCC                  <  1:2972035/99‑1
                                                                                   TGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC                >  2:1244553/1‑99
                                                                                   TGGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC                >  1:405502/1‑99
                                                                                    GGACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC               <  1:2054780/99‑1
                                                                                      ACATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTG             <  2:2213265/99‑1
                                                                                       CATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGT            <  1:959488/99‑1
                                                                                        ATGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT           >  1:1670168/1‑99
                                                                                         TGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC          >  1:640993/1‑99
                                                                                         TGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC          <  2:300964/99‑1
                                                                                         TGCTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC          >  1:2063057/1‑99
                                                                                           CTTGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAG        >  2:601993/1‑99
                                                                                             TGCTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCT      >  1:2718463/1‑99
                                                                                               ccGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTAC    <  1:32114/97‑1
                                                                                                TGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACT   <  2:2207310/99‑1
                                                                                                TGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACT   <  2:1252942/99‑1
                                                                                                 GGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG  >  1:369771/1‑99
                                                                                                 GGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG  >  2:1503450/1‑99
                                                                                                                                                                                                    
CTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/252070‑252167
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG  <  NC_000913/258675‑258578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.