Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,397,381 Δ13,756 bp [ynaJ][ttcA] 16 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1397381 1411136 13756 130 [0] [0] 130 [ynaJ]–[ttcA] [ynaJ],uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,zntB,fnrS,ynaL,dbpA,[ttcA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 13973800 (0.000)129 (1.150) 80/194 0.1 100% coding (16/258 nt) ynaJ DUF2534 domain‑containing protein YnaJ
?NC_000913 1411137 = 0 (0.000)coding (812/936 nt) ttcA tRNA cytosine(32) 2‑sulfurtransferase TtcA

Only 100 of 130 total aligned reads displayed.

GGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1397282‑1397380
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGA  >  NC_000913/1411137‑1411233
                                                                                                                                                                                                    
 GTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACA                                                                                                  <  2:3066090/99‑1
 GTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACA                                                                                                  >  1:1340718/1‑99
  TTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACAC                                                                                                 >  1:2532706/1‑99
  TTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACAC                                                                                                 >  2:1559731/1‑99
    TTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTT                                                                                               <  2:1556098/99‑1
      CAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCA                                                                                             <  1:759146/99‑1
        GAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGA                                                                                           >  2:876041/1‑99
        GAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGA                                                                                           >  1:2133993/1‑99
          GCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAAC                                                                                         <  2:1821467/99‑1
          GCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAAC                                                                                         >  2:600502/1‑99
          GCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAAC                                                                                         >  2:588972/1‑99
          GCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAAC                                                                                         <  1:2073024/99‑1
          GCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAAC                                                                                         <  2:2174832/99‑1
           CAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACC                                                                                        >  1:1199042/1‑99
             GACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGT                                                                                      >  2:2688504/1‑99
             GACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGT                                                                                      >  2:1438547/1‑99
              ACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTG                                                                                     >  2:2895247/1‑99
              ACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTG                                                                                     >  1:505639/1‑99
               CAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGG                                                                                    >  1:2768173/1‑99
                     TGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATG                                                                              >  2:2158437/1‑99
                      GAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGC                                                                             <  1:882009/99‑1
                      GAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGC                                                                             >  1:1639995/1‑99
                       AAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCC                                                                            <  2:1420903/99‑1
                        AATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCT                                                                           >  2:262661/1‑99
                        AATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCT                                                                           <  2:2224867/99‑1
                            TCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGA                                                                       >  2:1834061/1‑99
                            TCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGA                                                                       >  2:373563/1‑99
                            TCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGA                                                                       <  1:3037230/99‑1
                              ATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAA                                                                     <  2:547228/99‑1
                              ATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAA                                                                     <  1:2757905/99‑1
                               TGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAAT                                                                    >  2:1462548/1‑99
                               TGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAAT                                                                    >  2:696327/1‑99
                                GGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATC                                                                   <  2:2469269/99‑1
                                GGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATC                                                                   <  2:1757742/99‑1
                                 GTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCG                                                                  >  1:1618084/1‑99
                                    TTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAAC                                                               >  1:1389771/1‑99
                                       TTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGG                                                            >  1:1751860/1‑99
                                        TACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGT                                                           <  1:2421103/99‑1
                                        TACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGT                                                           <  1:583294/99‑1
                                         ACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTT                                                          <  2:1989502/99‑1
                                         ACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTT                                                          <  2:1343509/99‑1
                                          CGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTG                                                         <  1:1592515/99‑1
                                           GTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGG                                                        <  2:1775934/99‑1
                                           GTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGG                                                        >  1:894569/1‑99
                                           GTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGG                                                        <  1:2367929/99‑1
                                           GTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGG                                                        <  2:2224796/99‑1
                                           GTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGG                                                        <  1:1771532/99‑1
                                           GTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGG                                                        <  1:2762289/99‑1
                                              TAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTAT                                                     <  2:2021277/99‑1
                                               AGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATC                                                    <  1:887346/99‑1
                                                   AACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCAC                                                >  2:165004/1‑99
                                                    ACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACA                                               <  2:2153470/99‑1
                                                    ACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACA                                               >  1:2307479/1‑99
                                                    ACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACA                                               <  2:2834186/99‑1
                                                     CAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAG                                              >  2:2303932/1‑99
                                                      AAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGA                                             >  2:347882/1‑99
                                                      AAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGA                                             <  1:876041/99‑1
                                                       AGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGAT                                            <  2:1069658/99‑1
                                                        GAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATG                                           <  1:1261375/99‑1
                                                        GAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATG                                           <  1:2223813/99‑1
                                                          AATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCG                                         >  2:726931/1‑99
                                                           ATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGA                                        <  1:2794843/99‑1
                                                            TTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAC                                       >  2:1412817/1‑99
                                                            TTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAC                                       >  2:390301/1‑99
                                                               GTCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGC                                    <  1:2666167/99‑1
                                                                TCTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCA                                   >  2:2230694/1‑99
                                                                 CTGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCAC                                  <  1:2595921/99‑1
                                                                  TGCACAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACC                                 >  1:2076122/1‑99
                                                                      CAAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAT                             <  2:1503833/99‑1
                                                                       AAGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATT                            <  1:2616033/99‑1
                                                                        AGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTC                           >  2:2897424/1‑99
                                                                        AGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTC                           >  1:1138181/1‑99
                                                                        AGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTC                           >  2:3091926/1‑99
                                                                        AGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTC                           >  2:448408/1‑99
                                                                        AGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTC                           <  2:1473609/99‑1
                                                                        AGGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTC                           >  1:1843020/1‑99
                                                                         GGATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCT                          >  2:1685804/1‑99
                                                                          GATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTG                         >  2:3029215/1‑99
                                                                          GATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTG                         >  2:494173/1‑99
                                                                           ATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGC                        >  2:1815922/1‑99
                                                                           ATTACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGC                        >  1:2317180/1‑99
                                                                             TACATCATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAT                      >  1:1154550/1‑99
                                                                                  CATGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGC                 >  2:183512/1‑99
                                                                                    TGATTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTG               >  1:1015874/1‑99
                                                                                       TTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAAC            >  1:1771474/1‑99
                                                                                       TTATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAAC            >  1:3086388/1‑99
                                                                                         ATGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACAT          <  2:2810462/99‑1
                                                                                          TGGCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATC         >  2:2096566/1‑99
                                                                                            GCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGT       >  2:1163274/1‑99
                                                                                            GCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGT       <  2:2465059/99‑1
                                                                                            GCGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGT       <  2:918602/99‑1
                                                                                             CGAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTC      >  2:2647785/1‑99
                                                                                              GAAATACTTCAGAACCGTGGGTTATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCT     <  2:1027309/99‑1
                                                                                              GAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCT     >  1:227972/1‑99
                                                                                              GAAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCT     <  1:196198/99‑1
                                                                                               AAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTC    >  2:5848/1‑99
                                                                                               AAACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTC    >  2:2490932/1‑99
                                                                                                AACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCG   >  1:2339652/1‑99
                                                                                                 ACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGA  <  1:455368/99‑1
                                                                                                 ACACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGA  <  1:2173495/99‑1
                                                                                                                                                                                                    
GGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1397282‑1397380
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGA  >  NC_000913/1411137‑1411233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.