Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,397,381 Δ13,756 bp [ynaJ][ttcA] 16 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1397381 1411136 13756 130 [0] [0] 130 [ynaJ]–[ttcA] [ynaJ],uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,zntB,fnrS,ynaL,dbpA,[ttcA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 13973800 (0.000)129 (1.150) 80/194 0.1 100% coding (16/258 nt) ynaJ DUF2534 domain‑containing protein YnaJ
?NC_000913 1411137 = 0 (0.000)coding (812/936 nt) ttcA tRNA cytosine(32) 2‑sulfurtransferase TtcA

Only 100 of 130 total aligned reads displayed.

GTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTAACCACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATA  >  NC_000913/1411039‑1411235
                                                                                                  |                                                                                                  
gttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaaca                                                                                                    >  2:1779494‑M2/99‑99 (MQ=255)
gttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaaca                                                                                                    >  1:1340718‑M2/99‑99 (MQ=255)
gttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaaca                                                                                                    <  2:3066090‑M2/1‑1 (MQ=255)
 ttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacac                                                                                                   >  2:1559731‑M2/98‑99 (MQ=255)
 ttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacac                                                                                                   >  1:466689‑M2/98‑99 (MQ=255)
 ttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacac                                                                                                   >  1:2532706‑M2/98‑99 (MQ=255)
   ttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACtt                                                                                                 <  2:1556098‑M2/4‑1 (MQ=255)
   ttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACtt                                                                                                 <  2:1523025‑M2/4‑1 (MQ=255)
       gagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGa                                                                                             >  2:876041‑M2/92‑99 (MQ=255)
       gagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGa                                                                                             >  1:2133993‑M2/92‑99 (MQ=255)
         gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                           >  2:600502‑M2/90‑99 (MQ=255)
         gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                           >  2:588972‑M2/90‑99 (MQ=255)
         gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                           <  1:2073024‑M2/10‑1 (MQ=255)
         gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                           <  2:1821467‑M2/10‑1 (MQ=255)
          cagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAcc                                                                                          >  1:1199042‑M2/89‑99 (MQ=255)
            gacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGt                                                                                        >  2:1438547‑M2/87‑99 (MQ=255)
             acaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTg                                                                                       >  1:505639‑M2/86‑99 (MQ=255)
             acaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTg                                                                                       >  2:2895247‑M2/86‑99 (MQ=255)
              caacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTgg                                                                                      >  1:2768173‑M2/85‑99 (MQ=255)
                   gtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGAt                                                                                 >  2:1425232‑M2/80‑99 (MQ=255)
                    tgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATg                                                                                >  2:2158437‑M2/79‑99 (MQ=255)
                     gaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGc                                                                               >  1:1639995‑M2/78‑99 (MQ=255)
                     gaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGc                                                                               <  1:882009‑M2/22‑1 (MQ=255)
                       aatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCt                                                                             >  2:262661‑M2/76‑99 (MQ=255)
                       aatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCt                                                                             <  2:2224867‑M2/24‑1 (MQ=255)
                         tgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCttt                                                                           <  2:2592755‑M2/26‑1 (MQ=255)
                           tcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGa                                                                         >  2:373563‑M2/72‑99 (MQ=255)
                           tcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGa                                                                         >  2:1834061‑M2/72‑99 (MQ=255)
                           tcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGa                                                                         <  1:3037230‑M2/28‑1 (MQ=255)
                             atggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGaaa                                                                       <  2:547228‑M2/30‑1 (MQ=255)
                             atggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGaaa                                                                       <  1:2757905‑M2/30‑1 (MQ=255)
                              tggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAAt                                                                      >  2:1462548‑M2/69‑99 (MQ=255)
                              tggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAAt                                                                      >  2:696327‑M2/69‑99 (MQ=255)
                               ggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATc                                                                     <  2:2469269‑M2/32‑1 (MQ=255)
                               ggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATc                                                                     <  2:1757742‑M2/32‑1 (MQ=255)
                                gtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCg                                                                    >  1:1618084‑M2/67‑99 (MQ=255)
                                   ttgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAAc                                                                 >  1:1389771‑M2/64‑99 (MQ=255)
                                      ttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAgg                                                              >  1:1751860‑M2/61‑99 (MQ=255)
                                       tacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGt                                                             <  1:583294‑M2/40‑1 (MQ=255)
                                       tacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGt                                                             <  1:2421103‑M2/40‑1 (MQ=255)
                                        acgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGtt                                                            <  2:1343509‑M2/41‑1 (MQ=255)
                                        acgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGtt                                                            <  2:1989502‑M2/41‑1 (MQ=255)
                                         cgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTg                                                           <  1:1592515‑M2/42‑1 (MQ=255)
                                          gtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTgg                                                          <  1:2762289‑M2/43‑1 (MQ=255)
                                          gtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTgg                                                          <  2:2224796‑M2/43‑1 (MQ=255)
                                          gtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTgg                                                          <  1:1771532‑M2/43‑1 (MQ=255)
                                          gtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTgg                                                          <  1:2367929‑M2/43‑1 (MQ=255)
                                             taggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTAt                                                       <  2:1677929‑M2/46‑1 (MQ=255)
                                             taggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTAt                                                       <  2:2021277‑M2/46‑1 (MQ=255)
                                             taggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTAt                                                       <  1:986371‑M2/46‑1 (MQ=255)
                                              aggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATc                                                      <  1:887346‑M2/47‑1 (MQ=255)
                                                   acaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcaca                                                 >  1:2307479‑M2/48‑99 (MQ=255)
                                                   acaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcaca                                                 <  2:2153470‑M2/52‑1 (MQ=255)
                                                   acaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcaca                                                 <  2:2834186‑M2/52‑1 (MQ=255)
                                                     aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               >  2:347882‑M2/46‑99 (MQ=255)
                                                     aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                               <  1:876041‑M2/54‑1 (MQ=255)
                                                      agaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGAt                                              <  2:1069658‑M2/55‑1 (MQ=255)
                                                       gaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATg                                             <  1:1261375‑M2/56‑1 (MQ=255)
                                                       gaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATg                                             <  1:2223813‑M2/56‑1 (MQ=255)
                                                         aatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCg                                           >  2:726931‑M2/42‑99 (MQ=255)
                                                         aatttgtctgcacaaggattacatcatgattatcgcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCg                                           >  2:1880445‑M2/42‑99 (MQ=255)
                                                          atttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGa                                          <  2:2374896‑M2/59‑1 (MQ=255)
                                                          atttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGa                                          <  1:2794843‑M2/59‑1 (MQ=255)
                                                           tttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAc                                         >  2:390301‑M2/40‑99 (MQ=255)
                                                           tttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAc                                         >  2:1412817‑M2/40‑99 (MQ=255)
                                                              gtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGc                                      <  1:2666167‑M2/63‑1 (MQ=255)
                                                               tctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGca                                     >  2:2230694‑M2/36‑99 (MQ=255)
                                                                ctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcac                                    <  1:2595921‑M2/65‑1 (MQ=255)
                                                                 tgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcacc                                   >  1:2076122‑M2/34‑99 (MQ=255)
                                                                      aaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAtt                              <  1:2616033‑M2/71‑1 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             >  2:448408‑M2/28‑99 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             >  1:1138181‑M2/28‑99 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             >  2:2897424‑M2/28‑99 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             >  2:3091926‑M2/28‑99 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             >  1:1843020‑M2/28‑99 (MQ=255)
                                                                       aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTc                             <  2:1473609‑M2/72‑1 (MQ=255)
                                                                        ggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCt                            >  2:1685804‑M2/27‑99 (MQ=255)
                                                                         gattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTg                           >  2:494173‑M2/26‑99 (MQ=255)
                                                                         gattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTg                           >  2:3029215‑M2/26‑99 (MQ=255)
                                                                          attacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGc                          >  1:2317180‑M2/25‑99 (MQ=255)
                                                                          attacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGc                          >  2:1815922‑M2/25‑99 (MQ=255)
                                                                            tacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCAt                        >  1:1154550‑M2/23‑99 (MQ=255)
                                                                              catcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcg                      >  1:814834‑M2/21‑99 (MQ=255)
                                                                                   tgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTg                 >  1:1015874‑M2/16‑99 (MQ=255)
                                                                                      ttatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAAc              >  1:1771474‑M2/13‑99 (MQ=255)
                                                                                      ttatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAAc              >  1:3086388‑M2/13‑99 (MQ=255)
                                                                                        atggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACAt            <  2:1340722‑M2/89‑1 (MQ=255)
                                                                                        atggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACAt            <  2:2810462‑M2/89‑1 (MQ=255)
                                                                                          ggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCg          <  2:2199316‑M2/91‑1 (MQ=255)
                                                                                           gcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGt         <  2:2465059‑M2/92‑1 (MQ=255)
                                                                                           gcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGt         <  2:918602‑M2/92‑1 (MQ=255)
                                                                                            cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtc        >  2:2647785‑M2/7‑99 (MQ=255)
                                                                                             gaaatACTTCAGAACCGTGGGTTATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtct       <  2:1027309‑M2/94‑1 (MQ=255)
                                                                                             gaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtct       >  1:227972‑M2/6‑99 (MQ=255)
                                                                                             gaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtct       <  1:196198‑M2/94‑1 (MQ=255)
                                                                                              aaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc      >  2:5848‑M2/5‑99 (MQ=255)
                                                                                               aacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCg     >  1:2339652‑M2/4‑99 (MQ=255)
                                                                                                acACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGa    <  1:2173495‑M2/97‑1 (MQ=255)
                                                                                                acACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGa    <  2:2148849‑M2/97‑1 (MQ=255)
                                                                                                  aCTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATa  >  1:295748/1‑99 (MQ=255)
                                                                                                  |                                                                                                  
GTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTAACCACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATA  >  NC_000913/1411039‑1411235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: