New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 7127590 (1.240)1561 (22.540)
+GCTC
156/168 NT 93.5% intergenic (+10/‑76) araC/yabI DNA‑binding transcriptional dual regulator AraC/DedA family protein YabI
?NC_000913 366286 = 138 (1.900)coding (20/3075 nt) lacZ beta‑galactosidase

Only 100 of 2082 total aligned reads displayed.

TATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTAACGCCAGGGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGG  >  NC_000913/366188‑366385
                                                                                                  |                                                                                                   
 aaaaatgcaccggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGa                                                                                                    >  2:603973‑M2/98‑99 (MQ=255)
  aaaatgcaccggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGaa                                                                                                   <  2:961920‑M2/3‑1 (MQ=255)
  aaaatgcaccggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGaa                                                                                                   <  2:502160‑M2/3‑1 (MQ=255)
  aaaatgcaccggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGaa                                                                                                   <  2:178313‑M2/3‑1 (MQ=255)
  aaaatgcaccggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGaa                                                                                                   <  1:1553893‑M2/3‑1 (MQ=255)
   aaatgcaccggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAAt                                                                                                  <  2:269012‑M2/4‑1 (MQ=255)
    aatgcaccggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAatt                                                                                                 <  2:1100000‑M2/5‑2 (MQ=255)
      tgcaccggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCg                                                                                               >  2:1002011‑M2/93‑99 (MQ=255)
      tgcaccggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCg                                                                                               <  1:304264‑M2/7‑1 (MQ=255)
      tgcaccggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCg                                                                                               <  1:1161627‑M2/7‑1 (MQ=255)
        caccggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTa                                                                                             <  1:536993‑M2/9‑1 (MQ=255)
        caccggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTa                                                                                             <  2:1307968‑M2/9‑1 (MQ=255)
         accggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTaa                                                                                            <  1:394724‑M2/10‑1 (MQ=255)
            ggggccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCa                                                                                         <  2:1145156‑M2/13‑1 (MQ=255)
            ggggccaccccgagcgaattccgtgccggttgtgacgaaaaagtgaatgatgtagccgtcaagttgtcataattgataccgagctcGAATTCATAATCa                                                                                         <  2:1469607‑M2/13‑1 (MQ=255)
                ccagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCatgtc                                                                                     >  2:640414‑M2/83‑97 (MQ=255)
                 cagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATcatgtca                                                                                    <  2:237237‑M2/18‑4 (MQ=255)
                 cagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATcatgtca                                                                                    >  2:890378‑M2/82‑96 (MQ=255)
                 cagcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATcatgtca                                                                                    <  2:1056482‑M2/18‑4 (MQ=255)
                  agcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAAtcatgtcat                                                                                   <  2:858070‑M2/19‑5 (MQ=255)
                  agcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAAtcatgtcat                                                                                   <  1:1771385‑M2/19‑5 (MQ=255)
                  agcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAAtcatgtcat                                                                                   >  1:74620‑M2/81‑95 (MQ=255)
                  agcccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAAtcatgtcat                                                                                   >  1:446716‑M2/81‑95 (MQ=255)
                    cccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCATAATCATGTCATAg                                                                                <  2:739521‑M2/21‑1 (MQ=255)
                     ccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGc                                                                               <  1:1587035‑M2/22‑1 (MQ=255)
                     ccgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGc                                                                               <  1:650652‑M2/22‑1 (MQ=255)
                      gggATGTGCTGCAAGGCGATTAAGTTGGGTAACGCCAGGGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGAATCCGTAATCATGGTCATAGc                                                                               >  1:487872/1‑99 (MQ=255)
                      cgagcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCt                                                                              >  2:1336179‑M2/77‑99 (MQ=255)
                        agcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGt                                                                            >  1:936396‑M2/75‑99 (MQ=255)
                        agcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGt                                                                            <  1:1943566‑M2/25‑1 (MQ=255)
                         gcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGtt                                                                           <  2:929209‑M2/26‑1 (MQ=255)
                         gcgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGtt                                                                           <  1:1023088‑M2/26‑1 (MQ=255)
                          cgagttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGttt                                                                          <  1:1889962‑M2/27‑1 (MQ=255)
                             gttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCt                                                                       <  1:681052‑M2/30‑1 (MQ=255)
                             gttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCt                                                                       >  2:150995‑M2/70‑99 (MQ=255)
                              ttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCtg                                                                      <  1:1239971‑M2/31‑1 (MQ=255)
                              ttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCtg                                                                      <  1:273073‑M2/31‑1 (MQ=255)
                               tccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCtgt                                                                     <  2:121070‑M2/32‑1 (MQ=255)
                               tccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCtgt                                                                     <  2:526104‑M2/32‑1 (MQ=255)
                                  gtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCtgtgtg                                                                  >  2:69147‑M2/65‑99 (MQ=255)
                                    gccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGaa                                                                >  1:138608‑M2/63‑99 (MQ=255)
                                     ccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGaaa                                                               >  2:1820111‑M2/62‑99 (MQ=255)
                                       ggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAAtt                                                             >  2:1402420‑M2/60‑99 (MQ=255)
                                        gttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTg                                                            >  1:1628943‑M2/59‑99 (MQ=255)
                                        gttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTg                                                            >  2:393590‑M2/59‑99 (MQ=255)
                                        gttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTg                                                            >  1:606685‑M2/59‑99 (MQ=255)
                                            tgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTAt                                                        >  1:1128729‑M2/55‑99 (MQ=255)
                                             gaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATc                                                       <  1:83028‑M2/46‑1 (MQ=255)
                                             gaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATc                                                       >  1:1092182‑M2/54‑99 (MQ=255)
                                             gaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATc                                                       >  2:787658‑M2/54‑99 (MQ=255)
                                              aagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATcc                                                      <  1:106645‑M2/47‑1 (MQ=255)
                                              aagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATcc                                                      >  1:1516056‑M2/53‑99 (MQ=255)
                                              aagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATcc                                                      <  2:1446762‑M2/47‑1 (MQ=255)
                                                gaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGc                                                    <  1:705154‑M2/49‑1 (MQ=255)
                                                gaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGc                                                    <  1:1678252‑M2/49‑1 (MQ=255)
                                                   aaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTca                                                 >  2:2906‑M2/48‑99 (MQ=255)
                                                      gtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACaa                                              <  1:570602‑M2/55‑1 (MQ=255)
                                                       tgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAAt                                             <  2:1592722‑M2/56‑1 (MQ=255)
                                                        gaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAAtt                                            >  2:1030958‑M2/43‑99 (MQ=255)
                                                        gaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAAtt                                            <  2:1903803‑M2/57‑1 (MQ=255)
                                                           tgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCca                                         <  1:1290169‑M2/60‑1 (MQ=255)
                                                           tgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCca                                         <  2:213311‑M2/60‑1 (MQ=255)
                                                           tgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCca                                         >  2:1862689‑M2/40‑99 (MQ=255)
                                                               gtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCcacaca                                     <  1:335158‑M2/64‑1 (MQ=255)
                                                                tagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaa                                    >  1:1710668‑M2/35‑99 (MQ=255)
                                                                tagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaa                                    <  2:428838‑M2/65‑1 (MQ=255)
                                                                  gccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaaca                                  <  2:1178001‑M2/67‑1 (MQ=255)
                                                                  gccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaaca                                  <  2:1243410‑M2/67‑1 (MQ=255)
                                                                  gccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaaca                                  >  2:138282‑M2/33‑99 (MQ=255)
                                                                  gccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaaca                                  <  1:1800417‑M2/67‑1 (MQ=255)
                                                                  gccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaaca                                  <  2:1632819‑M2/67‑1 (MQ=255)
                                                                   ccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACAt                                 >  2:154800‑M2/32‑99 (MQ=255)
                                                                    cgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATa                                <  1:1322347‑M2/69‑1 (MQ=255)
                                                                    cgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATa                                <  1:1354008‑M2/69‑1 (MQ=255)
                                                                     gtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATAc                               >  2:359427‑M2/30‑99 (MQ=255)
                                                                     gtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATAc                               >  2:1269130‑M2/30‑99 (MQ=255)
                                                                      tcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACg                              >  1:1857243‑M2/29‑99 (MQ=255)
                                                                      tcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACg                              >  2:1950235‑M2/29‑99 (MQ=255)
                                                                       caagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGa                             <  2:1710428‑M2/72‑1 (MQ=255)
                                                                        cACGACGTTGTAAAACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGa                             >  1:36405/1‑99 (MQ=255)
                                                                        aagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAg                            >  1:812060‑M2/27‑99 (MQ=255)
                                                                         agttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGc                           <  1:1823113‑M2/74‑1 (MQ=255)
                                                                         agttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGc                           >  1:968355‑M2/26‑99 (MQ=255)
                                                                           ttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCg                         >  2:331616‑M2/24‑99 (MQ=255)
                                                                            tgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCgg                        >  1:1478087‑M2/23‑99 (MQ=255)
                                                                              tcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGaa                      >  1:864831‑M2/21‑99 (MQ=255)
                                                                              tcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGaa                      >  2:562166‑M2/21‑99 (MQ=255)
                                                                              tcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGaa                      >  1:892901‑M2/21‑99 (MQ=255)
                                                                                ataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGc                    >  1:234095‑M2/19‑99 (MQ=255)
                                                                                 taattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCa                   >  2:465589‑M2/18‑99 (MQ=255)
                                                                                  aattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCAt                  <  1:1002522‑M2/83‑1 (MQ=255)
                                                                                    ttggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATaa                >  1:207984‑M2/15‑99 (MQ=255)
                                                                                        taccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAgtg            <  2:821263‑M2/89‑1 (MQ=255)
                                                                                          ccgagctcGAGTTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTa          >  1:1745404‑M2/9‑99 (MQ=255)
                                                                                          ccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTa          <  2:175140‑M2/91‑1 (MQ=255)
                                                                                            gagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTaaa        <  2:1664011‑M2/93‑1 (MQ=255)
                                                                                              gctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGc      >  1:1207266‑M2/5‑99 (MQ=255)
                                                                                              gctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGc      >  2:758783‑M2/5‑99 (MQ=255)
                                                                                               ctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGcc     >  1:779920‑M2/4‑99 (MQ=255)
                                                                                                  gAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTg   >  1:144082/1‑99 (MQ=255)
                                                                                                  |                                                                                                   
TATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTAACGCCAGGGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGG  >  NC_000913/366188‑366385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.