| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 986,862 | IS1 (–) +9 bp | 100% | coding (113‑121/1089 nt) | ompF ← | outer membrane porin F |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 291401 | NA (NA) | 53 (0.810) | 46/174 | NT | 97.9% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 986862 = | 1 (0.020) | coding (121/1089 nt) | ompF | outer membrane porin F | |||||
| * | ? | NC_000913 | = 986870 | 1 (0.020) | 66 (1.000) | 51/176 | NT | 98.3% | coding (113/1089 nt) | ompF | outer membrane porin F |
| ? | NC_000913 | = 1050545 | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291303‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCAC > NC_000913/986862‑986958 TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC > 1:1292812/1‑99TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC > 1:205839/1‑99TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC > 1:467838/1‑99TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC > 1:507302/1‑99TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:113056/99‑1TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 2:69018/99‑1TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 2:942668/99‑1 GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAA < 2:333706/99‑1 GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAA > 2:1502872/1‑99 GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAA > 1:234427/1‑99 TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCT > 2:978027/1‑99 GAACAGGAGGGACAGCTGATATAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTT < 2:1410755/99‑1 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTT < 2:396412/99‑1 AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACC < 1:1381601/99‑1 AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACC < 1:574590/99‑1 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGT > 2:677161/1‑99 AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTA < 1:751649/99‑1 CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGAT > 1:609875/1‑99 AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATC < 2:1790332/99‑1 CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTA < 2:908147/99‑1 TGATAGAAACAGAAGCCACTGGCGCACCTCAAAAACACCATCATACACTAAATAAGTAAGTTGGCAGAATCACCCAACAGGTTTACCGTACAGATATAC > 2:172161/1‑99 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTAC < 1:682222/99‑1 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTT < 1:1536648/99‑1 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTT > 2:1121405/1‑99 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTG < 2:468240/99‑1 GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGT > 2:1620105/1‑99 GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGT < 2:416899/99‑1 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTT < 1:1125941/99‑1 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCA < 2:178650/99‑1 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCT > 1:1209190/1‑99 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTT < 2:1603084/99‑1 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTT < 1:481116/99‑1 TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTA < 1:1451242/99‑1 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAG > 1:368965/1‑99 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGAT < 1:927068/99‑1 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATT > 1:401141/1‑99 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATT < 2:1749164/99‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTC > 2:566628/1‑99 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCT < 1:1629155/99‑1 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCA < 1:896194/99‑1 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCA < 1:1101288/99‑1 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTT > 2:1795373/1‑99 TCATACACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCA > 1:34460/1‑99 CACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACC > 1:1734660/1‑99 ACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCT > 1:1572669/1‑99 ACTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCT > 1:1166995/1‑99 CTAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTG > 1:1172045/1‑99 TAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATGTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGC > 2:1671320/1‑99 TAAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGC < 1:1498663/99‑1 AAATCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCT > 2:335022/1‑99 ATCAGTAAGTTGGCAGCATCACCCAAGAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTAC < 2:209409/99‑1 TCAGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACT > 2:728307/1‑99 AGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAA > 2:344528/1‑99 AGTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAA < 1:1371230/99‑1 GTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAC > 2:1516029/1‑99 GTAAGTTGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAC > 1:1773707/1‑99 TGGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCA < 1:304119/99‑1 GGCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAG > 2:1756882/1‑99 GCAGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGG < 1:1230426/99‑1 AGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGA < 1:1130856/99‑1 AGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGA > 2:289297/1‑99 AGCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGA < 1:1037525/99‑1 GCATCACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGAC > 2:1373145/1‑99 ACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCA < 1:1080111/99‑1 ACCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCA > 2:713517/1‑99 ACCCAACAGCTTTACCGTACAGATCTACTTTGCTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCA > 2:981344/1‑99 CCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCAC > 2:880377/1‑99 CCCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCAC > 2:1352181/1‑99 TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291303‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCAC > NC_000913/986862‑986958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |