Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 986,937 IS5 (+) +4 bp 90.4% coding (43‑46/1089 nt) ompF ← outer membrane porin F

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 273955 =NA (NA)86 (1.230) 61/176 NT 91.1% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 986937 = 8 (0.120)coding (46/1089 nt) ompF outer membrane porin F
* ? NC_000913 = 275149NA (NA)64 (0.920) 50/176 NT 88.4% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 986940 8 (0.120)coding (43/1089 nt) ompF outer membrane porin F

Only 100 of 110 total aligned reads displayed.

GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/274052‑273955
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAA  >  NC_000913/986937‑987031
                                                                                                                                                                                                 
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                <  1:1311487/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                <  2:24923/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                <  2:1984608/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                <  1:418357/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                <  2:1916500/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                >  1:1282718/1‑99
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                <  1:1246925/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                <  1:636970/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                <  1:999438/99‑1
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                               >  1:1468049/1‑99
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                               >  2:1041154/1‑99
  TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                              >  1:1371191/1‑99
  TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                              >  1:722655/1‑99
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                             >  2:1900181/1‑99
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                             <  1:547777/99‑1
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                             <  2:824836/99‑1
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                             <  1:500897/99‑1
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                             <  1:355608/99‑1
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                             <  1:1212577/99‑1
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                             <  1:1536827/99‑1
     AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACA                                                                                           >  2:1156608/1‑99
     AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACA                                                                                           >  2:1431235/1‑99
      AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAG                                                                                          >  1:628533/1‑99
      AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAG                                                                                          <  1:1928101/99‑1
      AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAG                                                                                          <  2:1253313/99‑1
      AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAG                                                                                          >  2:766509/1‑99
       GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGA                                                                                         >  1:1749179/1‑99
       GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGA                                                                                         >  1:659618/1‑99
       GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGA                                                                                         <  2:1250273/99‑1
          ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCA                                                                                      >  2:1179985/1‑99
           TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAG                                                                                     >  2:1183034/1‑99
            TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGG                                                                                    <  1:1284571/99‑1
               CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGAC                                                                                 <  2:553699/99‑1
                  GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGAT                                                                              <  2:390267/99‑1
                     AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCAC                                                                           <  2:1041369/99‑1
                     AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCAC                                                                           >  1:1678056/1‑99
                      AAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACT                                                                          <  2:188434/99‑1
                          ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCA                                                                      >  2:1085834/1‑99
                          ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCA                                                                      >  1:1460939/1‑99
                           TCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAG                                                                     >  1:819151/1‑99
                           TCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAG                                                                     <  1:1732369/99‑1
                            CGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGA                                                                    >  1:1429130/1‑99
                             GGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAA                                                                   >  2:651751/1‑99
                               CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATA                                                                 <  2:1205475/99‑1
                               CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATA                                                                 >  1:329929/1‑99
                               CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATA                                                                 >  2:2015532/1‑99
                                  AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTG                                                              >  2:1751655/1‑99
                                  AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTG                                                              <  1:495031/99‑1
                                   AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGC                                                             >  1:821396/1‑99
                                    ACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCG                                                            >  2:1719750/1‑99
                                         AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCA                                                       >  2:1296925/1‑99
                                         AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCA                                                       <  1:1879612/99‑1
                                         AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCA                                                       <  1:2010463/99‑1
                                          AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACCATCACTGCCAGAATATTGCGCTTCAT                                                      >  1:1213054/1‑99
                                            AAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCA                                                    <  2:1265920/99‑1
                                             AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCAT                                                   >  2:1049300/1‑99
                                             AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCAT                                                   >  2:606638/1‑99
                                               TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTA                                                 <  2:499402/99‑1
                                               TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTA                                                 <  2:623257/99‑1
                                               TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTA                                                 <  1:1523338/99‑1
                                               TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTA                                                 >  1:1334421/1‑99
                                                 AAATGACTGAGTCAGCCGAGAAGGATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCTGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATT                                               <  2:238364/99‑1
                                                 AAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATT                                               <  1:92414/99‑1
                                                 AAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATT                                               <  1:1864441/99‑1
                                                      ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTA                                          >  2:1045179/1‑99
                                                      ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTA                                          <  1:659672/99‑1
                                                         GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCC                                       <  2:1325686/99‑1
                                                         GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCC                                       <  1:309402/99‑1
                                                          AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCT                                      >  2:245121/1‑99
                                                          AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCT                                      <  1:1530634/99‑1
                                                          AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCT                                      <  2:2043051/99‑1
                                                           GTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTC                                     >  1:213252/1‑99
                                                            TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCA                                    <  1:685402/99‑1
                                                             CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCAT                                   <  1:1117850/99‑1
                                                               GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG                                 >  1:432836/1‑99
                                                               GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGG                                 >  1:832663/1‑99
                                                                  GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTT                              >  1:1965432/1‑99
                                                                   AGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTT                             >  2:621606/1‑99
                                                                    GAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTT                            >  2:619661/1‑99
                                                                    GAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTT                            >  2:730362/1‑99
                                                                     AAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTT                           <  2:1697334/99‑1
                                                                     AAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTT                           <  1:1857201/99‑1
                                                                       GAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTT                         >  1:1613643/1‑99
                                                                       GAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTT                         >  2:1461166/1‑99
                                                                        AATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTA                        <  2:2039401/99‑1
                                                                        AATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTA                        >  1:564112/1‑99
                                                                          TTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATG                      >  2:1464820/1‑99
                                                                              CCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACAC                  >  1:1123077/1‑99
                                                                               CCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACC                 <  1:269859/99‑1
                                                                               CCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACC                 <  2:1076370/99‑1
                                                                                CGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCT                <  1:1083422/99‑1
                                                                                 GCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTG               >  1:793008/1‑99
                                                                                  CTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGC              >  2:701764/1‑99
                                                                                   TTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCC             >  2:1032897/1‑99
                                                                                    TATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCA            >  2:1213336/1‑99
                                                                                     ATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCAC           >  2:416328/1‑99
                                                                                      TTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACT          >  2:1196659/1‑99
                                                                                            CCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTC    >  1:1284420/1‑99
                                                                                             CTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCA   >  1:1907970/1‑99
                                                                                              TTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAA  >  2:680331/1‑99
                                                                                                                                                                                                 
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/274052‑273955
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAA  >  NC_000913/986937‑987031

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.