Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 986,937 IS5 (+) +4 bp 90.4% coding (43‑46/1089 nt) ompF ← outer membrane porin F

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 273955 =NA (NA)86 (1.230) 61/176 NT 91.1% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 986937 = 8 (0.120)coding (46/1089 nt) ompF outer membrane porin F
* ? NC_000913 = 275149NA (NA)64 (0.920) 50/176 NT 88.4% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 986940 8 (0.120)coding (43/1089 nt) ompF outer membrane porin F

Only 100 of 189 total aligned reads displayed.

ACCCTTGGAAAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAG  >  NC_000913/986839‑987035
                                                                                                  |                                                                                                  
gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                    <  1:1311487‑M2/1‑1 (MQ=255)
gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                    <  2:24923‑M2/1‑1 (MQ=255)
gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                    <  1:418357‑M2/1‑1 (MQ=255)
gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                    <  2:1916500‑M2/1‑1 (MQ=255)
gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                    >  1:1282718‑M2/99‑99 (MQ=255)
gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                    <  1:999438‑M2/1‑1 (MQ=255)
gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                    <  1:636970‑M2/1‑1 (MQ=255)
gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                    <  2:1984608‑M2/1‑1 (MQ=255)
aCCCTTGGAAAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctac                                                                                                    <  1:1318489/99‑1 (MQ=255)
 attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                   >  1:1468049‑M2/98‑99 (MQ=255)
  ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                  >  1:1703329‑M2/97‑99 (MQ=255)
   tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                 <  1:500897‑M2/4‑1 (MQ=255)
   tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                 <  1:355608‑M2/4‑1 (MQ=255)
   tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                 <  1:1536827‑M2/4‑1 (MQ=255)
    caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAc                                                                                                >  1:220022‑M2/95‑99 (MQ=255)
      aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACag                                                                                              <  1:1928101‑M2/7‑1 (MQ=255)
      aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACag                                                                                              >  2:766509‑M2/93‑99 (MQ=255)
       ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACaga                                                                                             >  1:659618‑M2/92‑99 (MQ=255)
       ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACaga                                                                                             >  1:1749179‑M2/92‑99 (MQ=255)
       ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACaga                                                                                             <  2:1250273‑M2/8‑1 (MQ=255)
       gAAAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaa                                                                                             <  2:389929‑M2/99‑5 (MQ=255)
       gAAAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaa                                                                                             <  2:1119397‑M2/99‑5 (MQ=255)
           tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAg                                                                                         >  2:1183034‑M2/88‑99 (MQ=255)
            ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAgg                                                                                        <  1:1284571‑M2/13‑1 (MQ=255)
            ataatGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgc                                                                                        <  2:562867‑M2/99‑10 (MQ=255)
               cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGAc                                                                                     <  2:553699‑M2/16‑1 (MQ=255)
                     aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCAc                                                                               <  2:1041369‑M2/22‑1 (MQ=255)
                     aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCAc                                                                               >  1:1678056‑M2/78‑99 (MQ=255)
                      aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACt                                                                              <  2:188434‑M2/23‑1 (MQ=255)
                          cAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctga                                                                          <  1:373050‑M2/99‑24 (MQ=255)
                          cAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCa                                                                          <  2:102129/99‑1 (MQ=255)
                           tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAg                                                                         >  1:819151‑M2/72‑99 (MQ=255)
                            gCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgata                                                                        >  1:1772444‑M2/1‑74 (MQ=255)
                            gCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgata                                                                        >  2:1639638‑M2/1‑74 (MQ=255)
                            gCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgata                                                                        <  1:1369244‑M2/99‑26 (MQ=255)
                            gCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgata                                                                        <  2:1240162‑M2/99‑26 (MQ=255)
                            cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGa                                                                        >  1:1429130‑M2/71‑99 (MQ=255)
                             ggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGaa                                                                       >  2:651751‑M2/70‑99 (MQ=255)
                               ttACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatga                                                                     <  2:1037534‑M2/99‑29 (MQ=255)
                               ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAata                                                                     >  2:2015532‑M2/68‑99 (MQ=255)
                               ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAata                                                                     <  2:1205475‑M2/32‑1 (MQ=255)
                                  ccGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagat                                                                  >  2:2019230‑M2/1‑68 (MQ=255)
                                  aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTg                                                                  >  2:1751655‑M2/65‑99 (MQ=255)
                                    gTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatca                                                                >  2:1537275‑M2/1‑66 (MQ=255)
                                    acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTgcg                                                                >  2:1719750‑M2/63‑99 (MQ=255)
                                     tACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTgcgc                                                               >  2:1301228/1‑99 (MQ=255)
                                        aGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtt                                                            >  1:1051513‑M2/1‑62 (MQ=255)
                                        aGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtt                                                            <  2:1431634‑M2/99‑38 (MQ=255)
                                         aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTtca                                                           <  1:2010463‑M2/42‑1 (MQ=255)
                                         aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTtca                                                           <  1:1879612‑M2/42‑1 (MQ=255)
                                         aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTtca                                                           <  2:858767‑M2/42‑1 (MQ=255)
                                          agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACCATCACTGCCAGAATATTGCGCTtcat                                                          >  1:1213054‑M2/57‑99 (MQ=255)
                                           gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTtcatc                                                         >  2:1391251‑M2/56‑99 (MQ=255)
                                            aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTtcatca                                                        <  2:1265920‑M2/45‑1 (MQ=255)
                                             aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTcatcat                                                       >  2:606638‑M2/54‑99 (MQ=255)
                                             aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTcatcat                                                       >  2:1049300‑M2/54‑99 (MQ=255)
                                              aCTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat                                                      >  1:471676‑M2/1‑56 (MQ=255)
                                               tgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCatta                                                     <  1:1523338‑M2/48‑1 (MQ=255)
                                                tttGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                    <  2:932393‑M2/99‑46 (MQ=255)
                                                 aaatgactgagtcagccgagaaggatttccccgcttattcgcaccttccCTAACAGAGCTGGGACGATCACTGCCAGAATATTGCGCTTCATCattatt                                                   <  2:238364‑M2/50‑1 (MQ=255)
                                                 aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCattatt                                                   <  1:1864441‑M2/50‑1 (MQ=255)
                                                         gagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTAccc                                           <  1:309402‑M2/58‑1 (MQ=255)
                                                            tcagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCa                                        <  1:685402‑M2/61‑1 (MQ=255)
                                                             cagccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCAt                                       <  1:1117850‑M2/62‑1 (MQ=255)
                                                              tGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                      >  1:1162090‑M2/1‑40 (MQ=255)
                                                               gccgagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATgg                                     >  1:832663‑M2/36‑99 (MQ=255)
                                                                ttATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                    <  2:548898‑M2/99‑62 (MQ=255)
                                                                  gagaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGttt                                  >  1:1965432‑M2/33‑99 (MQ=255)
                                                                  ataGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt                                  <  1:1315351‑M2/99‑64 (MQ=255)
                                                                   taGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                 <  2:50771‑M2/99‑65 (MQ=255)
                                                                   agaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGtttt                                 >  1:578949‑M2/32‑99 (MQ=255)
                                                                   agaagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGtttt                                 >  2:621606‑M2/32‑99 (MQ=255)
                                                                    aGATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                >  2:497956‑M2/1‑34 (MQ=255)
                                                                     gATTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca                               >  1:564822‑M2/1‑33 (MQ=255)
                                                                     aagaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGtttttt                               <  1:1857201‑M2/70‑1 (MQ=255)
                                                                      aTTTCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat                              >  1:1586652‑M2/1‑32 (MQ=255)
                                                                       gaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGtttttttt                             >  1:1613643‑M2/28‑99 (MQ=255)
                                                                       gaatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGtttttttt                             >  1:873469‑M2/28‑99 (MQ=255)
                                                                        aatttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTa                            <  2:2039401‑M2/73‑1 (MQ=255)
                                                                         tCTGCAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                           <  1:380489‑M2/99‑71 (MQ=255)
                                                                         tCTGCAGCGTTTGCAGTACCTGCTACTAAggaaagtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                           <  2:1461834‑M2/99‑71 (MQ=255)
                                                                         atttccccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTAt                           >  2:1165058‑M2/26‑99 (MQ=255)
                                                                             cAGCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                       >  1:437448‑M2/1‑25 (MQ=255)
                                                                               gCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                     <  1:239985‑M2/99‑77 (MQ=255)
                                                                               gCGTTTGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                     <  1:889861‑M2/99‑77 (MQ=255)
                                                                               ccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACAcc                     <  2:1076370‑M2/80‑1 (MQ=255)
                                                                               ccgcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACAcc                     <  1:269859‑M2/80‑1 (MQ=255)
                                                                                 gcttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTg                   >  1:793008‑M2/18‑99 (MQ=255)
                                                                                  tttGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca                  <  2:1936067‑M2/99‑80 (MQ=255)
                                                                                  tttGCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca                  <  2:1502883‑M2/99‑80 (MQ=255)
                                                                                  cttattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGc                  >  2:701764‑M2/17‑99 (MQ=255)
                                                                                    tattcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCa                >  2:1213336‑M2/15‑99 (MQ=255)
                                                                                     gCAGTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact               >  1:559284‑M2/1‑17 (MQ=255)
                                                                                     attcgcaccttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCAc               >  2:416328‑M2/14‑99 (MQ=255)
                                                                                        gTACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac            <  1:1663082‑M2/99‑86 (MQ=255)
                                                                                         tACCTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc           <  1:675927‑M2/99‑87 (MQ=255)
                                                                                            cTGCTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc        <  1:1054883‑M2/99‑90 (MQ=255)
                                                                                             cttccCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCa       >  1:1907970‑M2/6‑99 (MQ=255)
                                                                                               ctactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc     <  1:1252105‑M2/99‑93 (MQ=255)
                                                                                                  ctaACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAg  >  1:1210730/1‑99 (MQ=255)
                                                                                                  |                                                                                                  
ACCCTTGGAAAAATAATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAG  >  NC_000913/986839‑987035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.