Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 986,937 IS5 (+) +4 bp coding (43‑46/1089 nt) ompF ← outer membrane porin F

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 273955 =NA (NA)168 (1.340) 87/196 0.1 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 986937 = 0 (0.000)coding (46/1089 nt) ompF outer membrane porin F
* ? NC_000913 = 275149NA (NA)169 (1.350) 85/196 0.2 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 986940 0 (0.000)coding (43/1089 nt) ompF outer membrane porin F

Only 100 of 168 total aligned reads displayed.

GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/274052‑273955
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAA  >  NC_000913/986937‑987034
                                                                                                                                                                                                    
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                   <  1:2331029/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                   >  1:3110507/1‑99
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                   >  1:3166637/1‑99
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                   <  2:437389/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                   <  1:2212238/99‑1
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACAGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                                   >  2:1100694/1‑99
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                                  >  2:3124453/1‑99
 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                                  >  2:1192500/1‑99
  TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                                 >  1:1003873/1‑99
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                                >  1:756519/1‑99
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                                <  2:2632717/99‑1
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                                <  2:3211766/99‑1
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                                >  1:2565480/1‑99
   TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                                <  2:1616375/99‑1
     AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACA                                                                                              >  1:2400655/1‑99
      AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAG                                                                                             >  1:1353576/1‑99
      AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAG                                                                                             >  1:2838635/1‑99
       GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGA                                                                                            <  2:399118/99‑1
        GCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAG                                                                                           >  2:1381663/1‑99
           TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAG                                                                                        >  1:3124205/1‑99
            TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGG                                                                                       <  2:592664/99‑1
             TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGG                                                                                      <  2:276016/99‑1
               CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGAC                                                                                    <  1:1572277/99‑1
                 GGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGA                                                                                  >  1:1809514/1‑99
                   AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATC                                                                                <  2:1202324/99‑1
                    GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCA                                                                               >  2:2993200/1‑99
                     AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCAC                                                                              >  1:2257800/1‑99
                     AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCAC                                                                              >  1:2550721/1‑99
                       AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTG                                                                            <  2:1677194/99‑1
                        AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGC                                                                           >  1:426226/1‑99
                          ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCA                                                                         >  1:962210/1‑99
                          ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCA                                                                         >  2:1836227/1‑99
                          ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCA                                                                         >  2:852995/1‑99
                           TCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAG                                                                        <  2:337146/99‑1
                              GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAAT                                                                     >  1:2458551/1‑99
                               CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATA                                                                    >  1:1993976/1‑99
                                TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATAT                                                                   <  2:2290869/99‑1
                                TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATAT                                                                   <  1:3201747/99‑1
                                TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATAT                                                                   <  1:3157534/99‑1
                                  AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTG                                                                 <  2:1688718/99‑1
                                   AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGC                                                                >  2:1994735/1‑99
                                    ACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCG                                                               >  1:2991448/1‑99
                                     CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGC                                                              <  2:3260133/99‑1
                                       TGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTT                                                            >  1:1634367/1‑99
                                       TGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCCAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTT                                                            >  2:2596827/1‑99
                                        GAAGAACTGAAATGACTGCGTCAGCCGAGAAGAATTTACCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTC                                                           <  2:558891/99‑1
                                        GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTC                                                           >  1:2672742/1‑99
                                         AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCA                                                          <  1:1331189/99‑1
                                         AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCA                                                          >  2:2741771/1‑99
                                          AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCAT                                                         <  2:1441903/99‑1
                                           GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATC                                                        >  2:2801493/1‑99
                                            AAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCA                                                       <  2:2027761/99‑1
                                             AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGGTTCATCAT                                                      >  2:721226/1‑99
                                             AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCAT                                                      <  2:512285/99‑1
                                              ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATT                                                     >  1:664657/1‑99
                                               TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTA                                                    >  1:1704725/1‑99
                                               TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTA                                                    <  2:1121371/99‑1
                                                 AAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATT                                                  >  1:1395652/1‑99
                                                  AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTT                                                 >  2:69573/1‑99
                                                  AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTT                                                 >  1:417459/1‑99
                                                   ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTA                                                <  1:726559/99‑1
                                                   ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTA                                                <  1:292513/99‑1
                                                   ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTA                                                <  2:887872/99‑1
                                                    TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTAT                                               >  1:876929/1‑99
                                                     GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATT                                              <  1:1470460/99‑1
                                                      ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTA                                             >  1:378585/1‑99
                                                       CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTAC                                            >  1:1549802/1‑99
                                                        TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACC                                           >  2:1032872/1‑99
                                                          AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCT                                         <  1:1284639/99‑1
                                                           GTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTC                                        >  2:3058738/1‑99
                                                            TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCA                                       >  2:1606542/1‑99
                                                            TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCA                                       <  1:1686483/99‑1
                                                            TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCA                                       <  1:44976/99‑1
                                                             CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCAT                                      <  2:3068262/99‑1
                                                                CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGT                                   <  1:2127616/99‑1
                                                                CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGT                                   >  1:1369767/1‑99
                                                                CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGT                                   >  2:2048961/1‑99
                                                                 CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTT                                  <  2:2482194/99‑1
                                                                   AGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTT                                >  2:1936856/1‑99
                                                                   AGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTT                                >  1:2812451/1‑99
                                                                   AGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTT                                >  2:236019/1‑99
                                                                    GAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTT                               <  1:2384178/99‑1
                                                                     AAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTT                              <  1:1126060/99‑1
                                                                     AAGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTT                              >  1:2146167/1‑99
                                                                      AGAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTT                             >  2:1158692/1‑99
                                                                       GAATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTT                            >  2:2695060/1‑99
                                                                        AATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTA                           <  1:2515739/99‑1
                                                                        AATTTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTA                           <  2:2618029/99‑1
                                                                           TTCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGA                        <  1:808878/99‑1
                                                                            TCCCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGAC                       >  2:662782/1‑99
                                                                              CCCGCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACAC                     <  1:2236361/99‑1
                                                                                 GCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTG                  <  1:2984428/99‑1
                                                                                 GCTTATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTG                  >  1:3023031/1‑99
                                                                                     ATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCAC              <  1:1060239/99‑1
                                                                                     ATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCAC              >  1:1951753/1‑99
                                                                                     ATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCAC              <  2:2812451/99‑1
                                                                                     ATTCGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCAC              <  2:2261937/99‑1
                                                                                        CGCACCTTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGC           <  1:1899715/99‑1
                                                                                              TTCCCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAA     <  2:2175543/99‑1
                                                                                                 CCTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAA  >  2:1738575/1‑99
                                                                                                                                                                                                    
GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/274052‑273955
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAA  >  NC_000913/986937‑987034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.