Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 986,937 IS5 (+) +4 bp coding (43‑46/1089 nt) ompF ← outer membrane porin F

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 273955 =NA (NA)168 (1.340) 87/196 0.1 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 986937 = 0 (0.000)coding (46/1089 nt) ompF outer membrane porin F
* ? NC_000913 = 275149NA (NA)169 (1.350) 85/196 0.2 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 986940 0 (0.000)coding (43/1089 nt) ompF outer membrane porin F

Only 100 of 169 total aligned reads displayed.

ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/275052‑275149
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTATTTTTCCAA  <  NC_000913/986940‑986843
                                                                                                                                                                                                    
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                   >  2:816655/1‑99
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                   >  2:2564656/1‑99
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                   <  1:1032185/99‑1
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                   <  2:1658008/99‑1
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                   <  1:2429824/99‑1
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                   <  1:1166094/99‑1
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                   <  1:968258/99‑1
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                   >  1:2812553/1‑99
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                   >  2:2689580/1‑99
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                   <  1:1427812/99‑1
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                   >  1:391232/1‑99
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT                                                                                                   <  2:578070/99‑1
 CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                  >  1:2692184/1‑99
 CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                  >  1:3261389/1‑99
 CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                  >  1:1740873/1‑99
 CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                  >  1:1702596/1‑99
 CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                  <  1:499422/99‑1
 CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT                                                                                                  <  2:643496/99‑1
  TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                 <  2:470805/99‑1
  TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                 >  2:3123216/1‑99
  TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA                                                                                                 >  2:2462819/1‑99
   GTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                <  2:1997095/99‑1
   GTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                <  2:3166425/99‑1
   GTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                <  1:2077023/99‑1
   GTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAG                                                                                                <  1:2193425/99‑1
    TCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGT                                                                                               >  1:2657933/1‑99
         GAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAG                                                                                          >  1:1449287/1‑99
         GAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAG                                                                                          >  1:3061147/1‑99
          AAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGG                                                                                         >  2:3249404/1‑99
          AAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGG                                                                                         >  1:1085324/1‑99
           AGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGT                                                                                        >  2:2215982/1‑99
            GGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTA                                                                                       >  2:732135/1‑99
             GTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTAC                                                                                      <  2:1911203/99‑1
              TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACT                                                                                     <  1:2268157/99‑1
                AGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGC                                                                                   >  1:2869022/1‑99
                 GTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCA                                                                                  >  1:3103227/1‑99
                   TGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGGTCTCATATCAGAGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAA                                                                                <  2:184778/99‑1
                     ATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACG                                                                              >  1:1740951/1‑99
                      TGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGC                                                                             <  2:146653/99‑1
                         CTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGC                                                                          >  1:1283048/1‑99
                          TCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCA                                                                         <  1:1180845/99‑1
                               ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAAT                                                                    >  1:3047690/1‑99
                                  AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTA                                                                 <  1:1546730/99‑1
                                  AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTA                                                                 >  1:1846941/1‑99
                                   ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTAT                                                                <  1:2330208/99‑1
                                   ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTAT                                                                >  1:1970325/1‑99
                                    CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATA                                                               <  1:5726/99‑1
                                     CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAA                                                              <  2:1569120/99‑1
                                     CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAA                                                              <  2:536849/99‑1
                                     CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAA                                                              >  2:2591346/1‑99
                                      CTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAAC                                                             <  1:2286374/99‑1
                                      CTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAAC                                                             >  2:1641722/1‑99
                                        GTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAA                                                           >  1:2676852/1‑99
                                         TTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAA                                                          >  1:2146732/1‑99
                                          TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAG                                                         <  1:712860/99‑1
                                           CTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGA                                                        <  1:1298970/99‑1
                                           CTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGA                                                        <  1:2230165/99‑1
                                              TGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGG                                                     >  2:2108156/1‑99
                                                GCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCA                                                   >  1:103753/1‑99
                                                 CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAA                                                  >  1:3226900/1‑99
                                                   CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACA                                                >  1:1802309/1‑99
                                                     AGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAA                                              >  2:887788/1‑99
                                                      GATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAG                                             >  2:1905370/1‑99
                                                       ATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGT                                            >  2:455163/1‑99
                                                          ACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGA                                         >  2:1350281/1‑99
                                                          ACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGA                                         <  1:2184736/99‑1
                                                          ACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGA                                         >  1:1918702/1‑99
                                                          ACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGA                                         >  1:33725/1‑99
                                                          ACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGA                                         >  1:1871771/1‑99
                                                             AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCT                                      <  2:602541/99‑1
                                                             AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCT                                      >  1:102707/1‑99
                                                                ATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTA                                   <  2:2386402/99‑1
                                                                 TGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTAC                                  >  1:2506761/1‑99
                                                                   ATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGG                                <  1:505195/99‑1
                                                                   ATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGG                                <  2:1010464/99‑1
                                                                      TCATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAA                             >  1:804520/1‑99
                                                                        ATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAG                           >  2:2645573/1‑99
                                                                        ATATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAG                           >  2:1105304/1‑99
                                                                         TATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGC                          >  2:3217692/1‑99
                                                                         TATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGC                          <  1:1597360/99‑1
                                                                         TATCAGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGC                          >  2:119650/1‑99
                                                                             AGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTT                      <  2:660228/99‑1
                                                                             AGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTT                      <  2:2870406/99‑1
                                                                             AGGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTT                      <  1:100337/99‑1
                                                                              GGGACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTG                     >  2:2086597/1‑99
                                                                                 ACTTGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTC                  >  2:2531920/1‑99
                                                                                    TGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGC               >  2:1087947/1‑99
                                                                                    TGTTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGC               >  1:1571365/1‑99
                                                                                      TTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCAT             >  2:2723417/1‑99
                                                                                      TTCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCAT             <  2:2127013/99‑1
                                                                                       TCGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATT            <  1:976903/99‑1
                                                                                        CGCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTA           <  1:282709/99‑1
                                                                                         GCACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTAT          <  1:1256403/99‑1
                                                                                          CACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTATT         >  1:100295/1‑99
                                                                                          CACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTATT         >  1:3102903/1‑99
                                                                                          CACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTATT         <  1:870437/99‑1
                                                                                           ACCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTATTT        >  2:1273006/1‑99
                                                                                            CCTTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTATTTT       >  1:1636831/1‑99
                                                                                              TTCCTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTATTTTTC     <  1:147247/99‑1
                                                                                                 CTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTATTTTTCCAA  >  1:2055691/1‑99
                                                                                                                                                                                                    
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/275052‑275149
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTATTTTTCCAA  <  NC_000913/986940‑986843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.