New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 366316 =16708 (248.370)24 (0.380) 15/164 NT 0.10% intergenic (‑11/+112) lacZ/lacI beta‑galactosidase/DNA‑binding transcriptional repressor LacI
?NC_000913 366351 = 30378 (485.030)intergenic (‑46/+77) lacZ/lacI beta‑galactosidase/DNA‑binding transcriptional repressor LacI
Rejected: Frequency below/above cutoff threshold.

Only 100 of 66087 total aligned reads displayed.

GCTGCAAGGCGATTAAGTTGGGTAACGCCAGGGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATT  >  NC_000913/366217‑366414
                                                                                                   |                                                                                                  
gttccgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCt                                                                                                    <  1:176814‑M2/30‑1 (MQ=255)
 cgactggaaagcgggcagtgagcgcaacgcaattaatgtgagttagctcactcattaggcaccccaggctttacactttatgcttccggctcgtatgtt                                                                                                    >  1:1992711‑M1/99‑99 (MQ=255)
  gactggaaagcgggcagtgagcgcaacgcaattaatgtgagttagctcactcattaggcaccccaggctttacactttatgcttccggctcgtatgttg                                                                                                   <  1:1827097‑M1/2‑1 (MQ=255)
   actggaaagcgggcagtgagcgcaacgcaattaatgtgagttagctcactcattaggcaccccaggctttacactttatgcttccggctcgtatgttgt                                                                                                  <  2:1721649‑M1/3‑1 (MQ=255)
     tggaaagcgggcagtgagcgcaacgcaattaatgtgagttagctcactcattaggcaccccaggctttacactttatgcttccggctcgtatgttgtgt                                                                                                <  2:1827896‑M1/5‑1 (MQ=255)
     gtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCtgtgtg                                                                                               <  1:2702032‑M2/35‑1 (MQ=255)
      tgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGa                                                                                              >  2:671102‑M2/64‑99 (MQ=255)
      ggaaagcgggcagtgagcgcaacgcaattaatgtgagttagctcactcattaggcaccccaggctttacactttatgcttccggctcgtatgttgtgtg                                                                                               >  1:2917684‑M1/94‑99 (MQ=255)
        ccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGaaa                                                                                            <  1:2537596‑M2/38‑1 (MQ=255)
         cggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAAt                                                                                           >  2:2689820‑M2/61‑99 (MQ=255)
           gttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTg                                                                                         <  1:1110610‑M2/41‑1 (MQ=255)
              gtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTa                                                                                      >  1:3028181‑M2/56‑99 (MQ=255)
              gtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTa                                                                                      >  1:2646411‑M2/56‑99 (MQ=255)
               tgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTAt                                                                                     <  1:2973319‑M2/45‑1 (MQ=255)
                gaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATc                                                                                    <  2:1228183‑M2/46‑1 (MQ=255)
                gaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATc                                                                                    >  1:34652‑M2/54‑99 (MQ=255)
                gaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATc                                                                                    <  2:89087‑M2/46‑1 (MQ=255)
                    aaaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCt                                                                                >  1:226527‑M2/50‑99 (MQ=255)
                     aaaagtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTc                                                                               >  2:945363‑M2/49‑99 (MQ=255)
                         gtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACaa                                                                           <  1:737501‑M2/55‑1 (MQ=255)
                         gtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACaa                                                                           <  1:2319963‑M2/55‑1 (MQ=255)
                         gtgaatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACaa                                                                           >  1:105448‑M2/45‑99 (MQ=255)
                            aatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTc                                                                        >  1:1715365‑M2/42‑99 (MQ=255)
                            aatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTc                                                                        <  2:2744033‑M2/58‑1 (MQ=255)
                            aatgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTc                                                                        >  1:1882096‑M2/42‑99 (MQ=255)
                             atgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTcc                                                                       >  2:2528257‑M2/41‑99 (MQ=255)
                              tgatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGCTTCCTGTGTGAAATTGTTATCCGCTCACAATTCca                                                                      >  2:1991025‑M2/40‑99 (MQ=255)
                               gatgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCcac                                                                     <  2:2205476‑M2/61‑1 (MQ=255)
                                atgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCcaca                                                                    >  1:854272‑M2/38‑99 (MQ=255)
                                atgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCcaca                                                                    <  1:2374783‑M2/62‑1 (MQ=255)
                                 tgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCcacac                                                                   >  1:681798‑M2/37‑99 (MQ=255)
                                 tgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCcacac                                                                   >  1:623375‑M2/37‑99 (MQ=255)
                                 tgtagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCcacac                                                                   <  2:2099195‑M2/63‑1 (MQ=255)
                                     gccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaaca                                                               <  2:725390‑M2/67‑1 (MQ=255)
                                     gccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaaca                                                               <  1:1000081‑M2/67‑1 (MQ=255)
                                       cgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATa                                                             <  2:1070678‑M2/69‑1 (MQ=255)
                                       cgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATa                                                             <  1:908545‑M2/69‑1 (MQ=255)
                                       cgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATa                                                             <  1:568054‑M2/69‑1 (MQ=255)
                                        gtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATAc                                                            <  2:564611‑M2/70‑1 (MQ=255)
                                         tcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACg                                                           >  1:1164716‑M2/29‑99 (MQ=255)
                                           aagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAg                                                         <  2:1773056‑M2/73‑1 (MQ=255)
                                            agttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGc                                                        >  1:1935210‑M2/26‑99 (MQ=255)
                                            agttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGc                                                        <  2:3018573‑M2/74‑1 (MQ=255)
                                            agttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGc                                                        >  1:795229‑M2/26‑99 (MQ=255)
                                              ttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCg                                                      >  1:2157419‑M2/24‑99 (MQ=255)
                                                  cataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAg                                                  >  1:2812228‑M2/20‑99 (MQ=255)
                                                    taattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCa                                                <  2:1504683‑M2/82‑1 (MQ=255)
                                                    taattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCa                                                >  2:2047656‑M2/18‑99 (MQ=255)
                                                     aattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCAt                                               >  1:248244‑M2/17‑99 (MQ=255)
                                                          gtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAgt                                          >  2:1881035‑M2/12‑99 (MQ=255)
                                                           taccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAgtg                                         >  1:2427113‑M2/11‑99 (MQ=255)
                                                           taccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAgtg                                         <  2:101921‑M2/89‑1 (MQ=255)
                                                             ccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTa                                       <  2:2636654‑M2/91‑1 (MQ=255)
                                                               gagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTaaa                                     <  1:458672‑M2/93‑1 (MQ=255)
                                                                agctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAg                                    <  1:122228‑M2/94‑1 (MQ=255)
                                                                agctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAg                                    >  2:392322‑M2/6‑99 (MQ=255)
                                                                 gctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGc                                   <  2:1122309‑M2/95‑1 (MQ=255)
                                                                 gctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACACACGAGCCGGAAGCATAAAGTGTAAAGc                                   >  2:44767‑M2/5‑99 (MQ=255)
                                                                  ctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGcc                                  >  1:2758438‑M2/4‑99 (MQ=255)
                                                                   tcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCt                                 >  2:2258919‑M2/3‑99 (MQ=255)
                                                                   tcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCt                                 <  1:1386840‑M2/97‑1 (MQ=255)
                                                                       attcGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTgggg                             >  1:963388/4‑99 (MQ=255)
                                                                        ttcGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGt                            >  2:834675/3‑99 (MQ=255)
                                                                            tAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCt                        <  2:2909500/99‑1 (MQ=255)
                                                                            tAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCt                        >  2:507738/1‑99 (MQ=255)
                                                                              aTCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTaa                      <  2:2853889/99‑1 (MQ=255)
                                                                              aTCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTaa                      <  1:2591307/99‑1 (MQ=255)
                                                                              aTCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTaa                      >  1:1275524/1‑99 (MQ=255)
                                                                              aTCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTaa                      <  1:2104907/99‑1 (MQ=255)
                                                                              aTCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTaa                      <  1:39976/99‑1 (MQ=255)
                                                                                tcatgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAt                     >  2:1283985/5‑99 (MQ=255)
                                                                                tcatgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAt                     >  2:215283/5‑99 (MQ=255)
                                                                                tcatgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAt                     <  2:2580871/95‑1 (MQ=255)
                                                                                tcatgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAt                     <  2:2420904/95‑1 (MQ=255)
                                                                                 catgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtg                    >  2:616053/4‑99 (MQ=255)
                                                                                 catgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtg                    <  2:247351/96‑1 (MQ=255)
                                                                                  atgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtga                   >  2:2368372/3‑99 (MQ=255)
                                                                                  atgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtga                   <  2:779187/97‑1 (MQ=255)
                                                                                  atgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtga                   >  2:1936087/3‑99 (MQ=255)
                                                                                  atgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtga                   <  2:1397525/97‑1 (MQ=255)
                                                                                   tgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtgag                  >  2:2312190/2‑99 (MQ=255)
                                                                                    gTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtgagt                 >  2:1175603/1‑99 (MQ=255)
                                                                                    gTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtgagt                 <  2:338706/99‑1 (MQ=255)
                                                                                    gTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtgagt                 <  2:2960732/99‑1 (MQ=255)
                                                                                     tCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtgagtg                <  1:1663691/99‑1 (MQ=255)
                                                                                        tAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGc             >  1:511943/1‑99 (MQ=255)
                                                                                        tAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGc             <  1:133106/99‑1 (MQ=255)
                                                                                        tAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGc             >  2:1613072/1‑99 (MQ=255)
                                                                                        tAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGc             <  1:149669/99‑1 (MQ=255)
                                                                                          gCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTa           <  1:2863815/99‑1 (MQ=255)
                                                                                          gCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTa           >  1:1440946/1‑99 (MQ=255)
                                                                                           cTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTaa          >  1:1610294/1‑99 (MQ=255)
                                                                                            tGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAAc         <  1:2211434/99‑1 (MQ=255)
                                                                                              tttCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTc       <  2:2798303/99‑1 (MQ=255)
                                                                                              tttCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTc       >  2:1451654/1‑99 (MQ=255)
                                                                                               ttCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTca      <  2:1667710/99‑1 (MQ=255)
                                                                                               ttCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTca      <  1:1554290/99‑1 (MQ=255)
                                                                                                tCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTcac     >  2:1342927/1‑99 (MQ=255)
                                                                                                 ccTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTcaca    <  1:2046429/99‑1 (MQ=255)
                                                                                                   TGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACAtt  <  2:1560934‑M1/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
GCTGCAAGGCGATTAAGTTGGGTAACGCCAGGGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATT  >  NC_000913/366217‑366414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.