New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 366316 =16708 (248.370)24 (0.380) 15/164 NT 0.10% intergenic (‑11/+112) lacZ/lacI beta‑galactosidase/DNA‑binding transcriptional repressor LacI
?NC_000913 366351 = 30378 (485.030)intergenic (‑46/+77) lacZ/lacI beta‑galactosidase/DNA‑binding transcriptional repressor LacI
Rejected: Frequency below/above cutoff threshold.

Only 100 of 62120 total aligned reads displayed.

TTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGG  >  NC_000913/366252‑366449
                                                                                                   |                                                                                                  
tagccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaa                                                                                                    >  1:2647951‑M2/35‑99 (MQ=255)
  gccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaaca                                                                                                  <  2:2645880‑M2/67‑1 (MQ=255)
  gccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACacaaca                                                                                                  <  2:1784185‑M2/67‑1 (MQ=255)
   ccgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACAt                                                                                                 <  2:2860395‑M2/68‑1 (MQ=255)
    cgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATa                                                                                                <  1:2318772‑M2/69‑1 (MQ=255)
    cgtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATa                                                                                                <  1:1606614‑M2/69‑1 (MQ=255)
     gtcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATAc                                                                                               <  2:2969364‑M2/70‑1 (MQ=255)
      tcaagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACg                                                                                              >  1:916335‑M2/29‑99 (MQ=255)
       caagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGa                                                                                             >  1:2429618‑M2/28‑99 (MQ=255)
       caagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGa                                                                                             >  1:1711525‑M2/28‑99 (MQ=255)
        aagttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAg                                                                                            >  2:2161233‑M2/27‑99 (MQ=255)
         agttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGc                                                                                           <  1:1498123‑M2/74‑1 (MQ=255)
         agttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGc                                                                                           <  2:2481688‑M2/74‑1 (MQ=255)
         agttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGc                                                                                           <  2:725943‑M2/74‑1 (MQ=255)
          gttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGcc                                                                                          <  2:2321871‑M2/75‑1 (MQ=255)
           ttgtcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCg                                                                                         <  2:61740‑M2/76‑1 (MQ=255)
              tcataattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGaa                                                                                      <  1:2484330‑M2/79‑1 (MQ=255)
                 taattggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCa                                                                                   <  2:1510749‑M2/82‑1 (MQ=255)
                   attggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATa                                                                                 <  1:80413‑M2/84‑1 (MQ=255)
                     tggtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATaaa                                                                               <  1:1056128‑M2/86‑1 (MQ=255)
                       gtaccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAgt                                                                             <  2:777182‑M2/88‑1 (MQ=255)
                        taccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAgtg                                                                            <  1:2539369‑M2/89‑1 (MQ=255)
                         accgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAgtgt                                                                           >  1:1387606‑M2/10‑99 (MQ=255)
                         accgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAgtgt                                                                           <  1:405396‑M2/90‑1 (MQ=255)
                          ccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTa                                                                          >  2:1729743‑M2/9‑99 (MQ=255)
                          ccgagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTa                                                                          <  1:466672‑M2/91‑1 (MQ=255)
                            gagctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTaaa                                                                        <  1:1989786‑M2/93‑1 (MQ=255)
                             agctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAg                                                                       <  1:2098768‑M2/94‑1 (MQ=255)
                             agctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAg                                                                       <  2:1183227‑M2/94‑1 (MQ=255)
                             agctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAg                                                                       <  2:1400180‑M2/94‑1 (MQ=255)
                               ctcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGcc                                                                     >  1:2703778‑M2/4‑99 (MQ=255)
                                tcGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCt                                                                    >  1:691569‑M2/3‑99 (MQ=255)
                                 cGAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTg                                                                   <  2:1350121‑M2/98‑1 (MQ=255)
                                  gAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTgg                                                                  >  2:1891644/1‑99 (MQ=255)
                                  gAATTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTgg                                                                  >  1:111048/1‑99 (MQ=255)
                                   aaTTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTggg                                                                 <  2:2060752/99‑1 (MQ=255)
                                   aaTTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTggg                                                                 <  1:1275783/99‑1 (MQ=255)
                                   aaTTCGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTggg                                                                 <  1:2152964/99‑1 (MQ=255)
                                       cGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGc                                                             >  2:2807012/1‑99 (MQ=255)
                                       cGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGc                                                             <  1:2978336/99‑1 (MQ=255)
                                       cGTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGc                                                             <  1:578272/99‑1 (MQ=255)
                                        gTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGcc                                                            <  1:2264114/99‑1 (MQ=255)
                                        gTAATCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGcc                                                            <  2:2375938/99‑1 (MQ=255)
                                          aaTCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTa                                                          <  1:861984/99‑1 (MQ=255)
                                          aaTCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTa                                                          >  2:566867/1‑99 (MQ=255)
                                           aTCATGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTaa                                                         >  2:834444/1‑99 (MQ=255)
                                             tcatgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAt                                                        >  1:1166129/5‑99 (MQ=255)
                                             tcatgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAt                                                        <  2:112953/95‑1 (MQ=255)
                                                tgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtgag                                                     <  2:888901/98‑1 (MQ=255)
                                                tgTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtgag                                                     >  2:1076033/2‑99 (MQ=255)
                                                   cATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtgagtga                                                  <  1:237571/99‑1 (MQ=255)
                                                   cATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAAtgagtga                                                  <  2:2267341/99‑1 (MQ=255)
                                                     tAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGc                                                >  2:2917901/1‑99 (MQ=255)
                                                     tAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGc                                                >  2:398093/1‑99 (MQ=255)
                                                     tAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGc                                                <  1:1222039/99‑1 (MQ=255)
                                                      aGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCt                                               >  2:1950347/1‑99 (MQ=255)
                                                        cTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTaa                                             >  1:1880710/1‑99 (MQ=255)
                                                         tGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAAc                                            >  2:510865/1‑99 (MQ=255)
                                                         tGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAAc                                            <  2:2003777/99‑1 (MQ=255)
                                                         tGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAAc                                            <  2:1567511/99‑1 (MQ=255)
                                                           tttCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTc                                          >  2:242735/1‑99 (MQ=255)
                                                           tttCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTc                                          >  2:2108980/1‑99 (MQ=255)
                                                           tttCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTc                                          <  2:2589897/99‑1 (MQ=255)
                                                            ttCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTca                                         <  1:286643/99‑1 (MQ=255)
                                                              ccTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTcaca                                       <  2:1620881/99‑1 (MQ=255)
                                                              ccTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTcaca                                       <  2:1292643/99‑1 (MQ=255)
                                                               cTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACAt                                      >  2:2535412/1‑99 (MQ=255)
                                                                TGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACAtt                                     <  1:971186‑M1/99‑1 (MQ=255)
                                                                   GTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAAt                                  >  1:1442471‑M1/1‑99 (MQ=255)
                                                                    TGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAAtt                                 >  2:944387‑M1/1‑99 (MQ=255)
                                                                    TGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAAtt                                 <  2:1235689‑M1/99‑1 (MQ=255)
                                                                     GAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTg                                <  1:1331224‑M1/99‑1 (MQ=255)
                                                                     GAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTg                                >  1:631611‑M1/1‑99 (MQ=255)
                                                                      aaaTTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAAttgc                               >  2:45247/1‑99 (MQ=255)
                                                                         ttGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAAttgcgtt                            >  1:521797/1‑99 (MQ=255)
                                                                          tGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAAttgcgttg                           >  1:2758322/1‑99 (MQ=255)
                                                                             tATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTACCTAATGAGTGAGCTAACTCACATTAATTGCGTTgcgc                        <  1:745732/99‑1 (MQ=255)
                                                                              aTCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCt                       <  2:672675/99‑1 (MQ=255)
                                                                               tCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTc                      >  2:1676315/1‑99 (MQ=255)
                                                                               tCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTc                      >  1:1552225/1‑99 (MQ=255)
                                                                               tCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTc                      >  2:3027337/1‑99 (MQ=255)
                                                                               tCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCa                     <  1:1660229/99‑1 (MQ=255)
                                                                                ccGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCa                     <  1:1765474/99‑1 (MQ=255)
                                                                                ccGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCa                     <  1:2042824/99‑1 (MQ=255)
                                                                                ccGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGAGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCa                     <  2:1025001/99‑1 (MQ=255)
                                                                                 cGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCAc                    <  1:1000079/99‑1 (MQ=255)
                                                                                 cGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCAc                    <  2:345890/99‑1 (MQ=255)
                                                                                 cGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCAc                    >  1:2812978/1‑99 (MQ=255)
                                                                                  gCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACt                   >  2:2752557/1‑99 (MQ=255)
                                                                                      acaATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGccc               >  1:3033421/1‑99 (MQ=255)
                                                                                      acaATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGccc               <  1:1824665/99‑1 (MQ=255)
                                                                                       caATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCg              >  2:1454031/1‑99 (MQ=255)
                                                                                       caATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCg              >  2:26983/1‑99 (MQ=255)
                                                                                        aaTTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGc             >  1:2209624/1‑99 (MQ=255)
                                                                                         aTTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCt            >  1:2923035/1‑99 (MQ=255)
                                                                                         aTTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTAACTGCCCGCt            >  2:2213756/1‑99 (MQ=255)
                                                                                          ttCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCtt           <  1:2594335/99‑1 (MQ=255)
                                                                                          ttCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCtt           <  1:1933730/99‑1 (MQ=255)
                                                                                              acacaACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCa       >  2:1839073‑M2/6‑99 (MQ=255)
                                                                                                acaACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGt     >  1:35273‑M2/4‑99 (MQ=255)
                                                                                                   |                                                                                                  
TTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGAATCCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGG  >  NC_000913/366252‑366449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.