| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4040816 | NA (NA) | 13 (0.220) | 11/156 | NT | 23.4% | intergenic (+180/+90) | rrfA/mobB | 5S ribosomal RNA/molybdopterin‑guanine dinucleotide biosynthesis adaptor protein |
| ? | NC_000913 | = 4040840 | 48 (0.710) | intergenic (+204/+66) | rrfA/mobB | 5S ribosomal RNA/molybdopterin‑guanine dinucleotide biosynthesis adaptor protein | |||||
TCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTT > NC_000913/4040723‑4040914 | catccgtcaggatggccttctgcttaatttgatgcctggcagtttaTTGTGGGCAGGACGACCGCCATAAACTGCCAGGCATCAAATTAaaaagaagac < 1:2917470‑M1/53‑3 (MQ=255) atccgtcaggatggccttctgcttaatttgatgcctggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGcc < 2:1510291‑M1/54‑1 (MQ=255) ccgtcaggatggccttctgcttaatttgatgcctggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCAt > 1:569278‑M1/44‑99 (MQ=255) cgtcaggatggccttctgcttaatttgatgcctggcagtttaTGGCGGGCAGGACGTCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATc < 1:1045770‑M1/57‑1 (MQ=255) gtcaggatggccttctgcttaatttgatgcctggcagtttaTGGCGGGCAGGAAGCCCGCCATAAACTTCCAGGCATCAAATTAAGCAGAAGGCcatgc < 1:1833477‑M1/58‑3 (MQ=255) ggATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA > 2:2184271‑M2/1‑99 (MQ=255) ggATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA > 2:1434373‑M2/1‑99 (MQ=255) ggATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA > 1:1032764‑M2/1‑99 (MQ=255) ggATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA > 1:910564‑M2/1‑99 (MQ=255) ggATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:63987‑M2/99‑1 (MQ=255) ggATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA > 1:339591‑M2/1‑99 (MQ=255) gATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAT < 1:804637‑M2/99‑1 (MQ=255) gATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAT < 2:1884312‑M2/99‑1 (MQ=255) gATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAT > 1:2982221‑M2/1‑99 (MQ=255) gATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAT < 1:1973671‑M2/99‑1 (MQ=255) gccttctgcttaatttgatgcctggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATg < 2:2501240‑M1/67‑1 (MQ=255) aTTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG < 2:2170803‑M2/99‑1 (MQ=255) tctgcttaatttgatgcctggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCt < 2:1416145‑M1/71‑1 (MQ=255) tctgcttaatttgatgcctggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCt < 1:2295024‑M1/71‑1 (MQ=255) gAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCT > 2:193394‑M2/1‑99 (MQ=255) aaCGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTT > 1:1059771‑M2/1‑99 (MQ=255) aaCGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTT < 1:2389584‑M2/99‑1 (MQ=255) aaCGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTT > 2:2544859‑M2/1‑99 (MQ=255) tgcttaatttgatgcctggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCttt < 1:1236903‑M1/73‑1 (MQ=255) tgcttaatttgatgcctggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCttt < 2:655733‑M1/73‑1 (MQ=255) taatttgatgcctggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGc > 2:1045770‑M1/23‑99 (MQ=255) aaGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTg > 2:2794051/1‑99 (MQ=34) aGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTgg > 1:1198997/1‑99 (MQ=35) aGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTgg < 1:984464/99‑1 (MQ=35) agcggCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttga > 1:624166‑M2/3‑86 (MQ=255) agcggCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttga > 1:882849‑M2/3‑86 (MQ=255) agcggCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttga > 1:1791853‑M2/3‑86 (MQ=255) ggCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGa < 2:1704816/99‑1 (MQ=255) ggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGa > 2:1177959‑M1/10‑74 (MQ=255) ggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGa < 1:1177959‑M1/65‑1 (MQ=255) cGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaa > 2:2972103/1‑99 (MQ=255) cGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaa > 2:374930/1‑99 (MQ=255) ggAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaaa > 2:577202/1‑99 (MQ=255) gAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaaaa > 1:1839237/1‑99 (MQ=255) tttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCa > 2:2455984‑M1/5‑59 (MQ=255) tttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCa < 1:2455984‑M1/55‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAAt < 1:458839/99‑1 (MQ=255) gggGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGc > 2:1700578‑M1/4‑99 (MQ=255) gTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGcc < 2:1440644/99‑1 (MQ=255) tGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagttta > 1:2336035‑M2/1‑72 (MQ=255) TGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGa > 1:1350004‑M1/1‑61 (MQ=255) TGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGa < 2:1350004‑M1/61‑1 (MQ=255) TGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCg > 2:2855866‑M1/1‑99 (MQ=255) TGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCg > 2:404180‑M1/1‑99 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttat > 2:868233‑M2/1‑71 (MQ=255) GCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGa > 2:1417899‑M1/1‑99 (MQ=255) GCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGa > 1:1688222‑M1/1‑99 (MQ=255) GCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGa > 2:2545760‑M1/1‑99 (MQ=255) cGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttatgg > 2:920713‑M2/1‑69 (MQ=255) CGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGAt > 2:806695‑M1/1‑99 (MQ=255) ggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttatggcg > 2:837515‑M2/1‑67 (MQ=255) GGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGc < 2:2125363‑M1/99‑1 (MQ=255) GCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCg < 1:2138385‑M1/99‑1 (MQ=255) CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGa > 2:430669‑M1/1‑99 (MQ=255) gACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGc > 1:565556/1‑99 (MQ=255) gcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTgg < 2:2800883/99‑1 (MQ=255) ccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgc < 2:337861‑M2/99‑43 (MQ=255) cgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGgcgc > 1:1324044/1‑99 (MQ=255) cgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGgcgc > 2:1228924/1‑99 (MQ=255) cgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGgcgc > 1:1291773/1‑99 (MQ=255) gccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgccc < 2:1423679‑M2/99‑45 (MQ=255) cATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTc > 1:393927/1‑99 (MQ=255) aaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccacc < 1:1323437‑M2/99‑51 (MQ=255) aaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTAt < 1:2584812/99‑1 (MQ=255) aaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTAt < 1:418178/99‑1 (MQ=255) aaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTAt > 1:557768/1‑99 (MQ=255) aaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTAt < 2:2127727/99‑1 (MQ=255) cTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATcc < 2:3033839/99‑1 (MQ=255) cTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATcc < 1:1091949/99‑1 (MQ=255) tGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCa > 1:516418/1‑99 (MQ=255) gCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAg > 2:1896332/1‑99 (MQ=255) ccATGCATCAAATTAAGCAGAAGGCCATCCTGAGGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGc < 2:2299579/99‑1 (MQ=255) ccAGTCATCAAATTAAGCAGAAAGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGc < 2:1008359/99‑1 (MQ=255) aGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatg > 2:548704‑M2/1‑42 (MQ=255) aGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatg < 1:548704‑M2/57‑16 (MQ=255) tCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgct < 1:2566558‑M2/99‑63 (MQ=255) tCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTAccct > 2:961958/1‑99 (MQ=255) cAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCtt < 2:2135580/99‑1 (MQ=255) aTTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCt < 1:2153179/99‑1 (MQ=255) ttAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCtt > 1:1105019/1‑99 (MQ=255) gAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGtt > 1:2361756/1‑99 (MQ=255) | TCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTT > NC_000913/4040723‑4040914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |