New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4040816NA (NA)13 (0.220) 11/156 NT 23.4% intergenic (+180/+90) rrfA/mobB 5S ribosomal RNA/molybdopterin‑guanine dinucleotide biosynthesis adaptor protein
?NC_000913 = 4040840 48 (0.710)intergenic (+204/+66) rrfA/mobB 5S ribosomal RNA/molybdopterin‑guanine dinucleotide biosynthesis adaptor protein

AACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCATCCACTCCACCA  >  NC_000913/4040742‑4040937
                                                                                                  |                                                                                                 
aaCGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTT                                                                                                   <  1:2389584‑M2/99‑1 (MQ=255)
aaCGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTT                                                                                                   >  2:2544859‑M2/1‑99 (MQ=255)
aaCGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTT                                                                                                   >  1:1059771‑M2/1‑99 (MQ=255)
 tgcttaatttgatgcctggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCttt                                                                                                  <  1:1236903‑M1/73‑1 (MQ=255)
 tgcttaatttgatgcctggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCttt                                                                                                  <  2:655733‑M1/73‑1 (MQ=255)
     taatttgatgcctggcagtttaTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGc                                                                                              >  2:1045770‑M1/23‑99 (MQ=255)
         aaGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTg                                                                                          >  2:2794051/1‑99 (MQ=34)
          aGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTgg                                                                                         >  1:1198997/1‑99 (MQ=35)
          aGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTgg                                                                                         <  1:984464/99‑1 (MQ=35)
             agcggCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttga                                                                                      >  1:624166‑M2/3‑86 (MQ=255)
             agcggCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttga                                                                                      >  1:1791853‑M2/3‑86 (MQ=255)
             agcggCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttga                                                                                      >  1:882849‑M2/3‑86 (MQ=255)
                ggCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGa                                                                                   <  2:1704816/99‑1 (MQ=255)
                    cGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaa                                                                               >  2:374930/1‑99 (MQ=255)
                    cGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaa                                                                               >  2:2972103/1‑99 (MQ=255)
                     ggAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaaa                                                                              >  2:577202/1‑99 (MQ=255)
                      gAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaaaa                                                                             >  1:1839237/1‑99 (MQ=255)
                       aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAAt                                                                            <  1:458839/99‑1 (MQ=255)
                         gggGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGc                                                                          >  2:1700578‑M1/4‑99 (MQ=255)
                          gTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGcc                                                                         <  2:1440644/99‑1 (MQ=255)
                           tGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagttta                                                                        >  1:2336035‑M2/1‑72 (MQ=255)
                           TGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCg                                                                        >  2:404180‑M1/1‑99 (MQ=255)
                           TGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCg                                                                        >  2:2855866‑M1/1‑99 (MQ=255)
                            ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttat                                                                       >  2:868233‑M2/1‑71 (MQ=255)
                             GCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGa                                                                      >  2:2545760‑M1/1‑99 (MQ=255)
                             GCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGa                                                                      >  2:1417899‑M1/1‑99 (MQ=255)
                             GCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGa                                                                      >  1:1688222‑M1/1‑99 (MQ=255)
                              cGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttatgg                                                                     >  2:920713‑M2/1‑69 (MQ=255)
                              CGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGAt                                                                     >  2:806695‑M1/1‑99 (MQ=255)
                                ggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttatggcg                                                                   >  2:837515‑M2/1‑67 (MQ=255)
                                GGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGc                                                                   <  2:2125363‑M1/99‑1 (MQ=255)
                                 GCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCg                                                                  <  1:2138385‑M1/99‑1 (MQ=255)
                                  CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGa                                                                 >  2:430669‑M1/1‑99 (MQ=255)
                                     gACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGc                                                              >  1:565556/1‑99 (MQ=255)
                                        gcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTgg                                                           <  2:2800883/99‑1 (MQ=255)
                                          ccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgc                                                         <  2:337861‑M2/99‑43 (MQ=255)
                                           cgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGgcgc                                                        >  2:1228924/1‑99 (MQ=255)
                                           cgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGgcgc                                                        >  1:1324044/1‑99 (MQ=255)
                                           cgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGgcgc                                                        >  1:1291773/1‑99 (MQ=255)
                                            gccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgccc                                                       <  2:1423679‑M2/99‑45 (MQ=255)
                                              cATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTc                                                     >  1:393927/1‑99 (MQ=255)
                                                  aaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccacc                                                 <  1:1323437‑M2/99‑51 (MQ=255)
                                                  aaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTAt                                                 >  1:557768/1‑99 (MQ=255)
                                                  aaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTAt                                                 <  2:2127727/99‑1 (MQ=255)
                                                  aaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTAt                                                 <  1:418178/99‑1 (MQ=255)
                                                  aaCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTAt                                                 <  1:2584812/99‑1 (MQ=255)
                                                    cTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATcc                                               <  2:3033839/99‑1 (MQ=255)
                                                    cTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATcc                                               <  1:1091949/99‑1 (MQ=255)
                                                     tGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCa                                              >  1:516418/1‑99 (MQ=255)
                                                      gCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAg                                             >  2:1896332/1‑99 (MQ=255)
                                                       ccATGCATCAAATTAAGCAGAAGGCCATCCTGAGGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGc                                            <  2:2299579/99‑1 (MQ=255)
                                                       ccAGTCATCAAATTAAGCAGAAAGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGc                                            <  2:1008359/99‑1 (MQ=255)
                                                         aGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatg                                                                                    >  2:548704‑M2/1‑42 (MQ=255)
                                                         aGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatg                                                                                    <  1:548704‑M2/57‑16 (MQ=255)
                                                              tCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgct                                     <  1:2566558‑M2/99‑63 (MQ=255)
                                                              tCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTAccct                                     >  2:961958/1‑99 (MQ=255)
                                                               cAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCtt                                    <  2:2135580/99‑1 (MQ=255)
                                                                  aTTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCt                                 <  1:2153179/99‑1 (MQ=255)
                                                                   ttAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCtt                                >  1:1105019/1‑99 (MQ=255)
                                                                          gAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGtt                         >  1:2361756/1‑99 (MQ=255)
                                                                           aaGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTc                        <  2:67889/99‑1 (MQ=255)
                                                                           aaGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTc                        >  1:2825619/1‑99 (MQ=255)
                                                                            aGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCt                       >  1:162245/1‑99 (MQ=255)
                                                                                  tCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCtttt                 >  1:667269/1‑99 (MQ=255)
                                                                                  tCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCtttt                 >  2:227266/1‑99 (MQ=255)
                                                                                  tCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCtttt                 >  2:2567505/1‑99 (MQ=255)
                                                                                     tGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCa              >  1:591085/1‑99 (MQ=255)
                                                                                     tGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCa              <  1:2355327/99‑1 (MQ=255)
                                                                                      gACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCAt             <  2:1129875/99‑1 (MQ=255)
                                                                                       aCGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCAtc            <  1:2644765/99‑1 (MQ=255)
                                                                                         ggATGTCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCAtcca          <  2:1294346/99‑1 (MQ=255)
                                                                                         ggATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccg          <  2:1896096‑M2/99‑90 (MQ=255)
                                                                                         ggATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccg          <  1:2158918‑M2/99‑90 (MQ=255)
                                                                                         ggATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccg          <  1:1949422‑M2/99‑90 (MQ=255)
                                                                                         ggATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccg          <  2:2286773‑M2/99‑90 (MQ=255)
                                                                                         ggATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCAtcca          <  1:2435834/99‑1 (MQ=255)
                                                                                          gATGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgg         <  1:1949944‑M2/99‑91 (MQ=255)
                                                                                          gATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCAtccac         >  1:1418860/1‑99 (MQ=255)
                                                                                          gATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCAtccac         >  2:268027/1‑99 (MQ=255)
                                                                                           aTGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCAtccact        <  2:1975352/99‑1 (MQ=255)
                                                                                            tGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcg       <  2:497992‑M2/99‑93 (MQ=255)
                                                                                            tGGCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcg       <  2:48439‑M2/99‑93 (MQ=255)
                                                                                            tGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCAtccactc       >  1:739240/1‑99 (MQ=255)
                                                                                             ggCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcgg      <  2:629054‑M2/99‑94 (MQ=255)
                                                                                             ggCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCAtccactcc      >  1:1736247/1‑99 (MQ=255)
                                                                                              gCCTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcgga     >  1:23410‑M2/1‑5 (MQ=255)
                                                                                                cTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatt   >  1:1567754‑M2/1‑3 (MQ=255)
                                                                                                cTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatt   >  2:2603442‑M2/1‑3 (MQ=255)
                                                                                                cTTctgcttaatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatt   >  1:254972‑M2/1‑3 (MQ=255)
                                                                                                 tttttGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCATCCACTccacca  >  1:2949207/1‑99 (MQ=255)
                                                                                                  |                                                                                                 
AACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGCGCGTCTTATCCAGCCTACTCTTGCTTATCCGTTCTGCTTTTGCATCCACTCCACCA  >  NC_000913/4040742‑4040937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.