| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 3,802,754 | IS5 (+) +4 bp | 16.2% | coding (302‑305/1020 nt) | waaO ← | UDP‑D‑glucose:(glucosyl)LPS alpha‑1,3‑glucosyltransferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1427599 = | NA (NA) | 17 (0.180) | 17/172 | NT | 15.9% | noncoding (1196/1196 nt) | IS5 | repeat region |
| ? | NC_000913 | 3802754 = | 88 (0.960) | coding (305/1020 nt) | waaO | UDP‑D‑glucose:(glucosyl)LPS alpha‑1,3‑glucosyltransferase | |||||
| * | ? | NC_000913 | = 1428794 | NA (NA) | 17 (0.180) | 17/172 | NT | 15.7% | noncoding (1/1196 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3802757 | 88 (0.970) | coding (302/1020 nt) | waaO | UDP‑D‑glucose:(glucosyl)LPS alpha‑1,3‑glucosyltransferase | |||||
Only 100 of 138 total aligned reads displayed.
TCTGCATCCAGATAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGATCATCATCACCA > NC_000913/3802661‑3802855 | tCTGCATCCAGATAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGc < 1:48187/99‑1 (MQ=255) gCATCCAGATAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGggaag > 1:1745808‑M2/1‑94 (MQ=255) cATCCAGATAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGggaagg < 2:2064877‑M2/99‑7 (MQ=255) tttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccCTAGGCAATGAg > 2:1623628‑M2/88‑99 (MQ=255) cAGATAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAgcg > 1:237148/1‑99 (MQ=255) cAGATAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAgcg > 1:890815/1‑99 (MQ=255) gATAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCa < 1:2332788/99‑1 (MQ=255) aTAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAg < 2:411034/99‑1 (MQ=255) aTAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAg > 1:1213641/1‑99 (MQ=255) aTAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAg > 1:1732263/1‑99 (MQ=255) tAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAGAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGt < 2:1212924/99‑1 (MQ=255) ggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccCTAGGCAATGAGCGCAGt < 1:464893‑M2/18‑1 (MQ=255) aaGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGggaaggtgcgaacaag < 1:1873594‑M2/99‑17 (MQ=255) aGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGa < 1:2359322/99‑1 (MQ=255) aGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGa > 1:2131063/1‑99 (MQ=255) ggACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGAt > 2:2014138/1‑99 (MQ=255) aCTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCa < 1:1070340/99‑1 (MQ=255) ttAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGggaaggtgcgaacaagttcctga > 2:1367201‑M2/1‑76 (MQ=255) ttAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCa < 2:966008/99‑1 (MQ=255) cggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccCTAGGCAATGAGCGCAGTCGATCACCAt < 2:172889‑M2/28‑1 (MQ=255) aGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGggaaggtgcgaacaagttcctgata > 1:2515060‑M2/1‑74 (MQ=255) ggCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTa > 2:1279768/1‑99 (MQ=255) ggCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTa > 1:1005318/1‑99 (MQ=255) gcgcCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTaa > 1:453983/1‑99 (MQ=255) ccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccCTAGGCAATGAGCGCAGTCGATCACCATTAAt > 1:727183‑M2/68‑99 (MQ=255) ccTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCa < 2:1687344/99‑1 (MQ=255) ccTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCa < 1:2009485/99‑1 (MQ=255) ttattaATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGa < 2:64943/99‑1 (MQ=255) tattaATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGggaaggtgcgaacaagttcctgatatgagatca > 1:2452993‑M2/1‑66 (MQ=255) tattaATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGat > 2:2268589/1‑99 (MQ=255) tattaATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGat < 2:38510/99‑1 (MQ=255) attaATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGata < 1:145332/99‑1 (MQ=255) cgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGatatat < 1:1127901‑M2/41‑1 (MQ=255) gaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATAtt > 1:1444332‑M2/58‑99 (MQ=255) ataaAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGggaaggtgcgaacaagttcctgatatgagatcatcata < 1:1447953‑M2/99‑39 (MQ=255) aattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATAtttt < 2:1406232‑M2/44‑1 (MQ=255) aaaGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGggaaggtgcgaacaagttcctgatatgagatcatcatatt > 1:2115079‑M2/1‑59 (MQ=255) ttttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTaa > 2:1575901‑M2/54‑99 (MQ=255) gTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAAt < 1:1321085/99‑1 (MQ=255) tAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatc < 1:2466078‑M2/99‑45 (MQ=255) tAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAAtt > 1:1432167/1‑99 (MQ=255) aaTCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatcc > 1:1736643‑M2/1‑54 (MQ=255) aTCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCt > 2:2259736/1‑99 (MQ=255) tCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTg > 2:771523/1‑99 (MQ=255) tGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGt > 2:210311/1‑99 (MQ=255) tGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGt < 2:2505127/99‑1 (MQ=255) gCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGtt < 1:1861284/99‑1 (MQ=255) gcgagtcagcttgggaagaaatgacctgcttattcgcaccttccCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGttt > 2:2286968‑M2/45‑99 (MQ=255) gcgagtcagcttgggaagaaatgacctgcttattcgcaccttccCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGttt < 2:1396052‑M2/55‑1 (MQ=255) cAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcg < 2:2146557‑M2/99‑52 (MQ=255) aTAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTta > 1:578533/1‑99 (MQ=255) aTAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTta < 2:479433/99‑1 (MQ=255) aaaCGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGc > 2:285792/1‑99 (MQ=255) aaCGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCa > 2:2447943/1‑99 (MQ=255) aaCGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCa > 1:2527478/1‑99 (MQ=255) ttgggaagaaatgacctgcttattcgcaccttccCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCaa < 2:599279‑M2/65‑1 (MQ=255) aCGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCaa < 2:1845865/99‑1 (MQ=255) aCGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCaa > 1:1399680/1‑99 (MQ=255) cGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAAc > 2:2414323/1‑99 (MQ=255) aaaaTATATTGCATGAGTCCAATTCTTAGTGCTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagaggga < 1:1611619‑M2/99‑65 (MQ=255) aaaaTATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGc < 2:1257356/99‑1 (MQ=255) aaaaTATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGc < 2:2109452/99‑1 (MQ=255) aaaaTATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGc < 2:405778/99‑1 (MQ=255) aaaaTATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGc > 2:2202009/1‑99 (MQ=255) aaaaTATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTATGGTTTTATACTGCAACGc > 1:739081/1‑99 (MQ=255) aaaTATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCTCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGcc > 1:2279982/1‑99 (MQ=255) aaaTATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGcc > 2:766001/1‑99 (MQ=255) atatatTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAg > 2:1335835/1‑99 (MQ=255) atatTGCATGAGTCCAATTCTTAGTGCTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatca > 2:2157431‑M2/1‑30 (MQ=255) atatTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAggg > 2:1063119/1‑99 (MQ=255) tatTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGc > 1:92123/1‑99 (MQ=255) tatTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGc > 2:2232983/1‑99 (MQ=255) ttGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCAt > 1:233802/1‑99 (MQ=255) aTGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCaaa < 1:775847/99‑1 (MQ=255) aTGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCaaa < 1:1971253/99‑1 (MQ=255) tGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCaaaa < 1:600321/99‑1 (MQ=255) aGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATa > 2:2360599/1‑99 (MQ=255) aGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATa < 1:1865666/99‑1 (MQ=255) gTCCAATTCTTAGTGCTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaa < 2:967900‑M2/99‑81 (MQ=255) gTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATAc < 1:1156249/99‑1 (MQ=255) gTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATAc > 1:2266498/1‑99 (MQ=255) gTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATAc > 2:1028957/1‑99 (MQ=255) ccAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACtt < 2:402270/99‑1 (MQ=255) cAATTCTTAGTGCTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactc < 2:2162465‑M2/99‑84 (MQ=255) cAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTa < 1:416675/99‑1 (MQ=255) cAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTa < 1:1371827/99‑1 (MQ=255) cAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTa < 1:2417265/99‑1 (MQ=255) cAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTa > 1:2437361/1‑99 (MQ=255) cAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTa < 2:1467917/99‑1 (MQ=255) aaTTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTAc > 2:1062772/1‑99 (MQ=255) tCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGat < 2:1190150/99‑1 (MQ=255) ttAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGatca > 1:2184667/1‑99 (MQ=255) ttAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGatca > 1:159020/1‑99 (MQ=255) ttAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGatca > 1:1421629/1‑99 (MQ=255) tAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGatcat < 2:1213641/99‑1 (MQ=255) gTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGatcatca < 1:1089610/99‑1 (MQ=255) gTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGatcatca < 2:1670465/99‑1 (MQ=255) tGCTAGGCGCTGTGCGCAGTCGATCACCATTAATCAGATATATTTTAATTATGGTTTTATACTGCAACACCAGGGCATCAAAATACTTACGagcatcaa > 2:764738/1‑98 (MQ=255) tAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactcaccttcgccgata > 2:529743‑M2/1‑3 (MQ=255) ggCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGATCATCATCACCa > 2:1301702/1‑99 (MQ=255) | TCTGCATCCAGATAAAGGACTTTAGGCGCCTTATTAATAAAGTAATCTGCAATAACAAAACGAAAATATATTGCATGAGTCCAATTCTTAGTGCTAGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGATCATCATCACCA > NC_000913/3802661‑3802855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |