mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 4 (0.040) | 4/170 | NT | 3.2% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 4541907 = | 127 (1.280) | intergenic (+348/‑130) | fimB/fimE | regulator for fimA/regulator for fimA | |||||
| * | ? | NC_000913 | 3652036 = | NA (NA) | 6 (0.060) | 6/176 | NT | 4.4% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 4541910 | 129 (1.300) | intergenic (+351/‑127) | fimB/fimE | regulator for fimA/regulator for fimA | |||||
| * | ? | NC_000913 | 2868098 = | 78 (0.780) | 3 (0.030) | 3/176 | NT | 3.7% | coding (656/1140 nt) | nlpD | murein hydrolase activator NlpD |
| ? | NC_000913 | = 3131340 | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 5 (0.050) | 5/174 | NT | 4.4% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 4542023 | 109 (1.110) | intergenic (+464/‑14) | fimB/fimE | regulator for fimA/regulator for fimA | |||||
| * | ? | NC_000913 | = 1293040 | 96 (0.970) | 4 (0.040) | 4/176 | NT | 4.0% | intergenic (‑118/‑487) | hns/tdk | DNA‑binding transcriptional dual regulator H‑NS/thymidine/deoxyuridine kinase |
| ? | NC_000913 | = 1979270 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||