| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,003,479 | (G)6→9 | coding (866/879 nt) | xdhB → | putative xanthine dehydrogenase FAD‑binding subunit XdhB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3003473 | 2 (0.050) | 37 (0.860) +GGG |
33/258 | 0.2 | 94.9% | coding (860/879 nt) | xdhB | putative xanthine dehydrogenase FAD‑binding subunit XdhB |
| ? | NC_000913 | 3003474 = | 2 (0.050) | coding (861/879 nt) | xdhB | putative xanthine dehydrogenase FAD‑binding subunit XdhB | |||||
GCAAACGCTGGAAGCTATCAGCGAATCTGTCCTGCAAGATGTCGCCCCGCGTTCTTCATGGCGGGCCAGTAAAGAGTTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGC‑GGGGGGAAAATTGCAATGAATCACAGCGAAACAATTACCATCGAATGCACCATTAACGGGATGCCTTTTCAGCTTCACGCCGCACCAGGCACGCCGCTCTCGGAATTACTCCGCGAACAAGGACTGCTAAGTGT > NC_000913/3003336‑3003607 | gCAAACGCTGGAAGCTATCAGCGAATCTGTCCTGCAAGATGTCGCCCCGCGTTCTTCATGGCGGGCCAGTAAAGAGTTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCgg < 1:688699‑M1/140‑3 (MQ=255) cGCTGGAAGCTATCAGCGAATCTGTCCTGCAAGATGTCGCCCCGCGTTCTTCATGGCGGGCCAGTAAAGAGTTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggg < 2:26002‑M1/140‑8 (MQ=255) cTGGAAGCTATCAGCGAATCTGTCCTGCAAGATGTCGCCCCGCGTTCTTCATGGCGGGCCAGTAAAGAGTTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggg > 2:431798‑M1/1‑131 (MQ=255) tATCAGCGAATCTGTCCTGCAAGATGTCGCCCCGCGTTCTTCATGGCGGGCCAGTAAAGAGTTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgca < 1:431798‑M1/140‑18 (MQ=255) gCGAATCTGTCCTGCAAGATGTCGCCCCGCGTTCTTCATGGCGGGCCAGTAAAGAGATTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGAGATTAGCGAAGCCGTCGCC‑‑GCGGCgggggggggaaatttgaatgaa > 1:504316‑M1/1‑118 (MQ=255) gTCGCCCCGCGTTCTTCATGGCGGGTCAGTAAAGAGTTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattacca < 1:299347‑M1/140‑43 (MQ=255) cgcgTTCTTCATGGCGGGCCAGTAAAGAGGTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGGGATTAGCGAAGCCGTCGCC‑‑GCGGCgggggggggaaaatggaaagaaatacagcgaaacaaataccctcgaaag > 2:401812‑M1/1‑91 (MQ=255) gCCAGTAAAGAGTTTCGTTTGCATCTCATCCAGACGATGACCAAAAAAGGGATTAGGGAAGCCGTCCCCCGGGGGG‑GGGGGGGAAATTTCAATAAATACCAGGGAAAAAATTACCAACGAAAGAACCCTTAAAGGGGTGc > 2:454348/1‑140 (MQ=255) gCCAGTAAAGAGTTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCgggggggggaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgc > 1:69624‑M1/1‑74 (MQ=255) agTTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagct < 1:162095‑M1/140‑77 (MQ=255) agTTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagct > 2:575787‑M1/1‑64 (MQ=255) tttCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaaggcaccattaacgggatggcttttcagcttc > 1:723501‑M1/1‑62 (MQ=255) ttCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttca > 1:539770‑M1/1‑61 (MQ=255) tCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccaccgaatgctccaataacgggataccttttcagcttcac > 1:230214‑M1/1‑60 (MQ=255) cGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacg < 2:69624‑M1/140‑82 (MQ=255) cGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacg > 1:693362‑M1/1‑59 (MQ=255) tCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgcc > 1:524631‑M1/1‑57 (MQ=255) tCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgcc > 1:549574‑M1/1‑57 (MQ=255) tGCATCTCATCCAGACGATGCCAAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑CCGGCGGGGGGGAAAATTGCAATGAATCACAGCGAAACAATTACCATCGAATGCACCATTAACGGGATGCCTTTTCAGCTTCACGCCGCa < 2:125925/140‑1 (MQ=255) ctcATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccag > 1:650783‑M1/1‑50 (MQ=255) aGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgcc < 1:680246‑M1/140‑98 (MQ=255) aGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgcc > 2:432644‑M1/1‑43 (MQ=255) gACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccg < 2:403674‑M1/140‑99 (MQ=255) ggaTGACCAAAAAAGTGATTAGCGAACCCGTCGCC‑‑GCGGggggggggaaaattgcaatgaatcacagcgaaaaaattcccatcgactgcaccattaacgggatgccctttcagcttcacgccgcaccaggcacgccgct < 2:504316‑M1/139‑101 (MQ=255) tGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCgggggggggaaaattgcaatgaatcacagcgaaacaattaccatagaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctct < 2:58340‑M1/140‑104 (MQ=255) tGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCgggggggggaaaattgcaatgaatcacagcgaaacaattaccatagaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctct > 1:58340‑M1/1‑37 (MQ=255) tGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctctc > 2:456588‑M1/1‑37 (MQ=255) gACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaataaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctctcg > 1:185309‑M1/1‑36 (MQ=255) aaaaaaGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaataaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctctcggaat < 2:185309‑M1/140‑109 (MQ=255) aaaaaGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctctcggaatt < 2:549574‑M1/140‑110 (MQ=255) aaaaaGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctctcggaatt > 2:518843‑M1/1‑31 (MQ=255) aaaaaGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgcc < 2:38811‑M1/128‑98 (MQ=255) aaaaaGTGATTAGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgcc > 1:38811‑M1/1‑31 (MQ=255) tGATTAGCGAAGCCGTCCCC‑‑GCCGCggggggggaagattacaatgaattacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctctcggaattactccg < 2:230214‑M1/140‑116 (MQ=255) aGCGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctctcggaattactccgcgaac < 1:456588‑M1/140‑121 (MQ=255) cGAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacagttaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctctcggaattactccgcgaacaa < 1:563834‑M1/140‑123 (MQ=255) gAAGCCGTCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctctcggaattactccgcgaacaag < 2:693362‑M1/140‑124 (MQ=255) tCGCC‑‑GGGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctctcggaattactccgcgaacaaggactgct < 1:616717‑M1/140‑131 (MQ=255) tCGCC‑‑GCGGCggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctctcggaattactccgcgaacaaggactgct > 1:662134‑M1/1‑10 (MQ=255) gcggcggggggggaaaattgcaatgaatcacagcgaaacaattaccatcgaatgcaccattaacgggatgccttttcagcttcacgccgcaccaggcacgccgctctcggaattactccgcgaacaaggactgctaagtg < 1:575787‑M1/140‑136 (MQ=255) | GCAAACGCTGGAAGCTATCAGCGAATCTGTCCTGCAAGATGTCGCCCCGCGTTCTTCATGGCGGGCCAGTAAAGAGTTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCC‑‑GCGGC‑GGGGGGAAAATTGCAATGAATCACAGCGAAACAATTACCATCGAATGCACCATTAACGGGATGCCTTTTCAGCTTCACGCCGCACCAGGCACGCCGCTCTCGGAATTACTCCGCGAACAAGGACTGCTAAGTGT > NC_000913/3003336‑3003607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |