New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3137593	34 (0.690)	3 (0.060)	3/272	4.6	7.5%	coding (930/1860 nt)	gss	fused glutathionylspermidine amidase/glutathionylspermidine synthetase
	?	NC_000913	3137600 =	40 (0.830)					coding (923/1860 nt)	gss	fused glutathionylspermidine amidase/glutathionylspermidine synthetase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTATAGCCCTGCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTTGGTG  >  NC_000913/3137459‑3137725                                                                                                                                       |                                                                                                                                     ttATAGCCCTGCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAACTCCGTACGACCAGCGATCATATggctgtc                                                                                                                                 >  1:342611/1‑135 (MQ=255)     aGCCCTGCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGa                                                                                                                             <  1:71079/140‑1 (MQ=255)      gCCCTGCTCCGCCCACCGTTCGTGGCTCACGCCCGCTGCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGAc                                                                                                                            <  1:238084/140‑1 (MQ=255)       cccTGCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACg                                                                                                                           <  1:527820/140‑1 (MQ=255)       cccTGCTCCGCCCAACGCTCGAAGATCAAGCCCGCGTCGCTATGACAGCAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACg                                                                                                                           <  2:282282/140‑1 (MQ=255)        ccTGCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGc                                                                                                                          >  2:535834/1‑140 (MQ=255)           gCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCTATGCAGAAATCCGTACGACCAGTGAACATAGGGTGACGGCGACGCTGc                                                                                                                       >  2:212801/1‑140 (MQ=255)            cTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCTTGCAGAAATCCAAACGACCAGTGATTATATTGTGACGGCGACGCTGcc                                                                                                                      >  2:305627/1‑140 (MQ=255)                 cccAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGgag                                                                                                                 >  1:584735/1‑140 (MQ=255)                 cccAACGTTCGAGGAGCAAGCCCGCCTCGGTATGACATGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGgag                                                                                                                 <  1:393411/140‑1 (MQ=255)                           gAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAAc                                                                                                       <  2:584735/140‑1 (MQ=255)                                tCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGc                                                                                                  >  2:785169/1‑140 (MQ=255)                                         cTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATAT‑‑‑‑‑‑GGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCggg                                                                                   >  2:672339/1‑140 (MQ=255)                                              gTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGc                                                                                                  <  2:351761/126‑1 (MQ=255)                                              gTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGc                                                                                                  >  1:351761/1‑126 (MQ=255)                                              gTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCgg                                                                                    >  1:437865/1‑140 (MQ=255)                                               tATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGTCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCggg                                                                                   <  1:179544/140‑1 (MQ=255)                                               tATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCggg                                                                                   <  2:102936/140‑1 (MQ=255)                                                 tGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATAT‑‑‑‑‑‑GGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGaa                                                                           <  1:672339/140‑1 (MQ=255)                                                    cAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTc                                                                              >  2:161115/1‑140 (MQ=255)                                                                          aCTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAGCGTGGCCAGAGGATTTTCGGGATGTCGAACTGCGCCAGCAGGTTGTCa                                                        >  2:376232/1‑140 (MQ=255)                                                                              gTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCtt                                                    >  2:646468/1‑140 (MQ=255)                                                                               tAAACCTTCAGGCCACGCTCATACAAGCAGAAATCCAAACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCttt                                                   <  1:286560/140‑1 (MQ=255)                                                                                aaaCCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTc                                                  >  2:110312/1‑140 (MQ=255)                                                                                   ccTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGc                                               <  2:464113/140‑1 (MQ=255)                                                                                      tCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCa                                                 <  1:516466/135‑1 (MQ=255)                                                                                      tCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCa                                                 >  2:516466/1‑135 (MQ=255)                                                                                              cGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGt                                    <  1:523660/140‑1 (MQ=255)                                                                                              cGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGt                                    <  2:538925/140‑1 (MQ=255)                                                                                               gCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAAAAGCCCCAGCAGGTTGTTATCTTTCAGCACCTTGTCGGtt                                   >  2:340028/1‑140 (MQ=255)                                                                                                   aTCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGt                               <  1:785169/140‑1 (MQ=255)                                                                                                    tCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTg                              >  2:205625/1‑140 (MQ=255)                                                                                                       aTGCAGAAATCCATAAGACCAGCGATCATCTGGTGACTGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAg                           <  1:212801/140‑1 (MQ=255)                                                                                                                   aTACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTg               <  1:646468/140‑1 (MQ=255)                                                                                                                         ccAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTc         >  2:801767/1‑140 (MQ=255)                                                                                                                            gTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATGTTTCAGCACCTTTTCGGTTGCGTGAAGATAGATCAGGTGCAGCTCGtt      >  2:340465/1‑140 (MQ=255)                                                                                                                                tCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTtggtg  <  1:801767/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                     TTATAGCCCTGCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTTGGTG  >  NC_000913/3137459‑3137725

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.