New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3137593	34 (0.690)	3 (0.060)	3/272	4.6	7.5%	coding (930/1860 nt)	gss	fused glutathionylspermidine amidase/glutathionylspermidine synthetase
	?	NC_000913	3137600 =	40 (0.830)					coding (923/1860 nt)	gss	fused glutathionylspermidine amidase/glutathionylspermidine synthetase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGCCCTGCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTTGGTGGCTTTAATTAGCTC  >  NC_000913/3137463‑3137739                                                                                                                                          |                                                                                                                                            aGCCCTGCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGa                                                                                                                                           <  1:71079/140‑1 (MQ=255)  gCCCTGCTCCGCCCACCGTTCGTGGCTCACGCCCGCTGCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGAc                                                                                                                                          <  1:238084/140‑1 (MQ=255)   cccTGCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACg                                                                                                                                         <  1:527820/140‑1 (MQ=255)   cccTGCTCCGCCCAACGCTCGAAGATCAAGCCCGCGTCGCTATGACAGCAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACg                                                                                                                                         <  2:282282/140‑1 (MQ=255)    ccTGCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGc                                                                                                                                        >  2:535834/1‑140 (MQ=255)       gCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCTATGCAGAAATCCGTACGACCAGTGAACATAGGGTGACGGCGACGCTGc                                                                                                                                     >  2:212801/1‑140 (MQ=255)        cTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCTTGCAGAAATCCAAACGACCAGTGATTATATTGTGACGGCGACGCTGcc                                                                                                                                    >  2:305627/1‑140 (MQ=255)             cccAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGgag                                                                                                                               >  1:584735/1‑140 (MQ=255)             cccAACGTTCGAGGAGCAAGCCCGCCTCGGTATGACATGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGgag                                                                                                                               <  1:393411/140‑1 (MQ=255)                       gAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAAc                                                                                                                     <  2:584735/140‑1 (MQ=255)                            tCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGc                                                                                                                >  2:785169/1‑140 (MQ=255)                                     cTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATAT‑‑‑‑‑‑GGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCggg                                                                                                 >  2:672339/1‑140 (MQ=255)                                          gTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGc                                                                                                                <  2:351761/126‑1 (MQ=255)                                          gTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGc                                                                                                                >  1:351761/1‑126 (MQ=255)                                          gTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCgg                                                                                                  >  1:437865/1‑140 (MQ=255)                                           tATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGTCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCggg                                                                                                 <  1:179544/140‑1 (MQ=255)                                           tATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCggg                                                                                                 <  2:102936/140‑1 (MQ=255)                                             tGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATAT‑‑‑‑‑‑GGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGaa                                                                                         <  1:672339/140‑1 (MQ=255)                                                cAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTc                                                                                            >  2:161115/1‑140 (MQ=255)                                                                      aCTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAGCGTGGCCAGAGGATTTTCGGGATGTCGAACTGCGCCAGCAGGTTGTCa                                                                      >  2:376232/1‑140 (MQ=255)                                                                          gTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCtt                                                                  >  2:646468/1‑140 (MQ=255)                                                                           tAAACCTTCAGGCCACGCTCATACAAGCAGAAATCCAAACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCttt                                                                 <  1:286560/140‑1 (MQ=255)                                                                            aaaCCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTc                                                                >  2:110312/1‑140 (MQ=255)                                                                               ccTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGc                                                             <  2:464113/140‑1 (MQ=255)                                                                                  tCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCa                                                               >  2:516466/1‑135 (MQ=255)                                                                                  tCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCa                                                               <  1:516466/135‑1 (MQ=255)                                                                                          cGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGt                                                  <  2:538925/140‑1 (MQ=255)                                                                                          cGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGt                                                  <  1:523660/140‑1 (MQ=255)                                                                                           gCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAAAAGCCCCAGCAGGTTGTTATCTTTCAGCACCTTGTCGGtt                                                 >  2:340028/1‑140 (MQ=255)                                                                                               aTCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGt                                             <  1:785169/140‑1 (MQ=255)                                                                                                tCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTg                                            >  2:205625/1‑140 (MQ=255)                                                                                                   aTGCAGAAATCCATAAGACCAGCGATCATCTGGTGACTGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAg                                         <  1:212801/140‑1 (MQ=255)                                                                                                               aTACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTg                             <  1:646468/140‑1 (MQ=255)                                                                                                                     ccAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTc                       >  2:801767/1‑140 (MQ=255)                                                                                                                        gTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATGTTTCAGCACCTTTTCGGTTGCGTGAAGATAGATCAGGTGCAGCTCGtt                    >  2:340465/1‑140 (MQ=255)                                                                                                                            tCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTtggtg                <  1:801767/140‑1 (MQ=255)                                                                                                                                     gACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTTGGTGGCTTTAAtt       >  2:729306/1‑140 (MQ=255)                                                                                                                                      aCGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTTGGTGGCTTTAATTa      >  2:138440/1‑140 (MQ=255)                                                                                                                                      aCGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTTGGTGGCTTTAATTa      >  1:736644/1‑140 (MQ=255)                                                                                                                                      aCGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTTGGTGGCTTTAATTa      >  2:800289/1‑140 (MQ=255)                                                                                                                                      aCGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGAGAAGATAGATCAGGTGAAGCTGGTTGGTGGCTTTAATTa      >  2:212013/1‑140 (MQ=255)                                                                                                                                       cGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTTGGTGGCTTTAATTAg     >  2:409559/1‑140 (MQ=255)                                                                                                                                        ggCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTTGGTGGCTTTAATTAGc    >  2:470682/1‑140 (MQ=255)                                                                                                                                        ggCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTTGGTGGCTTTAATTAGc    >  2:767441/1‑140 (MQ=255)                                                                                                                                          cGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTTGGTGGCTTTAATTAGCTc  <  1:110312/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                            AGCCCTGCTCCGCCCAACGTTCGAGGATCAAGCCCGCTTCGGTATGACAGGAGGCGGAGTCGGCGTTGTACTCGTAAACCTTCAGGCCACGCTCATCCATGCAGAAATCCATACGACCAGTGATCATATGGTGACGGCGACGCTGCCAGGAGAGACGCAAACGTGGCCAGAGGATTTTCGGGATGTCGAACAGCGCCAGCAGGTTGTCATCTTTCAGCACCTTGTCGGTTGCGTGAAGATACATCAGGTGCAGCTCGTTGGTGGCTTTAATTAGCTC  >  NC_000913/3137463‑3137739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.