Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3762359–3765288	3765529–3765414	127–3171	20 [18]	[17] 24	rhsA	rhs element protein RhsA

GTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGA  >  NC_000913/3765513‑3765669                  |                                                                                                                                            gtgagtgaGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCt                   <  1:837566/140‑1 (MQ=32)  tgagtgagGAAAGCCGCTGCTGGCTGGCATCCTGCGGCCTGACCGTGGGGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCtt                  <  2:635926/140‑1 (MQ=16)  tgagtgagGAAAGCCGCCGCTGTCTGGCATCCTGCTGCCTGACCGTGGCGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACGGCGACCATCGCGGCCTGCCGCTGGCCCtt                  <  2:468519/140‑1 (MQ=11)      tgagGAAAGCCGCCGCTGGGGGACATCGTGCGGCCTGACAGTGGAGCAGATGCCCAACAAGATGGACCCGGTGGACGCGCCGGCGGGAAAAATCCACCTGTAACACTGCGCCCATCGCGGCCTGCCGCTGGCCATTATCa              >  2:1074347/1‑140 (MQ=11)      tgagGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCa              >  2:1548569/1‑140 (MQ=34)      tgagGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCa              >  1:82651/1‑140 (MQ=34)         ggAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCa           <  1:804536/140‑1 (MQ=37)          gAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACAGCGACCAACGCAGCGTGCCGCCGGCCCTTATCAGCaa          >  1:609216/1‑140 (MQ=11)             aGCCGCCGCTGGCTGGCTTCGTGCGGCCTGAGCGTCGAGTAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaagga       <  2:668607/140‑1 (MQ=255)              gccgccGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaaggaa      >  1:1004183/1‑140 (MQ=37)              gccgccGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaaggaa      >  2:274053/1‑140 (MQ=37)               ccgccgCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaaggaag     >  1:907506/1‑140 (MQ=37)                cgccgcTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaaggaagg    >  2:81569/1‑140 (MQ=37)                cgccgcTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaaggaagg    <  1:274053/140‑1 (MQ=40)                cgccgcTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaaggaagg    <  1:14243/140‑1 (MQ=40)                cgccgcTGGCTGGCACCGTGCGCCCTGACCGTGGAGCCGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaaggaagg    <  1:417051/140‑1 (MQ=255)                cgccgaTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaaggaagg    <  2:1291951/140‑1 (MQ=37)                  ccgcTGGCTGGCATCGTGCGGCCTGCCCGTGGAGCAGATCCAAACCCACATGGACACGGTGTGAACGCCGGAACGCAAAATCGCCCTGTACCACCGCAACCATCGCGGACTGCAGCTGGACCTTAACAGCAAGGAAGGGa  <  2:1271959/140‑1 (MQ=2)                  ccgcTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa  <  1:873428/140‑1 (MQ=38)                  ccgcTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa  >  1:668607/1‑140 (MQ=38)                  ccgcTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa  >  1:53474/1‑140 (MQ=38)                  ccgcTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa  <  1:1280850/140‑1 (MQ=40)                  ccgcTGGCTGGCATCGTCCGGCCTGACCGTGGAGCCGATTCAAAACCACATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa  <  2:596231/140‑1 (MQ=255)                  ccgcTGGCTGGCATCGATCGGCCTGACCGTGGACCAGATGCAAAACCAAATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa  <  2:663933/140‑1 (MQ=255)                  |                                                                                                                                            GTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGA  >  NC_000913/3765513‑3765669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑