| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 634,250 | Δ13 bp | coding (665‑677/1161 nt) | ybdL → | methionine‑oxo‑acid transaminase, PLP‑dependent |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 634250 | 634262 | 13 | 43 [0] | [0] 44 | ybdL | methionine‑oxo‑acid transaminase, PLP‑dependent |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 634249 | 0 (0.000) | 43 (0.730) | 36/276 | 0.5 | 100% | coding (664/1161 nt) | ybdL | methionine‑oxo‑acid transaminase, PLP‑dependent |
| ? | NC_000913 | 634263 = | 0 (0.000) | coding (678/1161 nt) | ybdL | methionine‑oxo‑acid transaminase, PLP‑dependent | |||||
TGGCAGCAGGCTGATTTCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCCGCAGCTGCGTGAGCGGGCAGTGGCGGTTTCTTCATTTGGCAAGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTT > NC_000913/634123‑634386 | tGGCAGCAGGCTGATTTCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcg > 2:555498‑M1/1‑127 (MQ=255) cagGCTGATTTCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttct > 2:485216‑M1/1‑121 (MQ=255) cagGCTGATTTCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcgggtttt > 2:34030‑M1/1‑121 (MQ=255) ggCTGATTTCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcaggggcggttttttc > 2:948653‑M1/1‑119 (MQ=255) gCTGATTTCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttca < 1:33774‑M1/140‑23 (MQ=255) ttCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggc < 1:34030‑M1/140‑29 (MQ=255) ttCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggc < 2:81041‑M1/140‑29 (MQ=255) ttCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggc < 1:555498‑M1/140‑29 (MQ=255) ttCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttgac < 1:688892‑M1/140‑29 (MQ=255) tCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggca < 1:928387‑M1/140‑30 (MQ=255) tCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttattcatttggca < 2:521022‑M1/140‑30 (MQ=255) cgccgcTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaa < 1:171576‑M1/140‑31 (MQ=255) gcTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcattttgcaagacc > 1:783710‑M1/1‑106 (MQ=255) gcTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacc < 1:909397‑M1/140‑35 (MQ=255) tttGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagaccta < 2:305294‑M1/140‑37 (MQ=255) tgGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttttttctttgggaaaaactatcat > 2:975086‑M1/1‑100 (MQ=255) ggCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCTCAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgac < 1:220135‑M1/140‑46 (MQ=255) tCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggct < 1:485216‑M1/140‑51 (MQ=255) tCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggct > 2:633684‑M1/1‑90 (MQ=255) ggCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaag > 1:868718‑M1/1‑84 (MQ=255) gCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagt < 2:16102‑M1/140‑58 (MQ=255) cACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtg > 2:245028‑M1/1‑82 (MQ=255) cGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtggg < 1:949331‑M1/140‑61 (MQ=255) ttttGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattg < 1:633684‑M1/140‑67 (MQ=255) aTTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctgggaaggggggtattttgtttcg > 2:270979‑M1/1‑67 (MQ=255) ttAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctgggaagtggggtattgtgttgcgc > 1:864832‑M1/1‑66 (MQ=255) ttAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgc < 1:975086‑M1/140‑75 (MQ=255) tAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcattttgcaagacctatcatatgaccagctggaaagtggggtattgtgttgcgcc > 1:703166‑M1/1‑65 (MQ=255) aGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgccagcgcccat < 2:480504‑M1/140‑85 (MQ=255) cGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttctttatttggcaagacctatcatatgaccggctggaaagtgggttatttttttgcgccagcgcccctcagcgc > 2:189388‑M1/1‑50 (MQ=255) cGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgccagcgcccatcagcgc < 1:432452‑M1/140‑91 (MQ=255) gCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgccagcgcccatcagcgccga < 2:868718‑M1/140‑94 (MQ=255) caTCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgccagcgcccatcagcgccgaaat > 2:195951‑M1/1‑44 (MQ=255) aCTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgccagcgcccatcagcgccgaaattcgca < 2:645765‑M1/140‑102 (MQ=255) aCTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgccagcgcccatcagcgccgaaattcgca < 1:375773‑M1/140‑102 (MQ=255) aCTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgccagcgcccatcagcgccgaaattcgca < 1:189388‑M1/140‑102 (MQ=255) ggCCATGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctgggaagtggggtattgtgtttcgcccgcgcccatcagcgccgaaattcgcaagggacatcagtat > 2:311853‑M1/1‑25 (MQ=255) tGCCAGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgccagcgcccatcagcgccgaaattcgcaaggtacatcagtatctgac > 2:801966‑M1/1‑20 (MQ=255) aGTGTGCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgccagcgcccatcagcgccgaaattcgcaaggtacatcagtatctgaccttt < 1:420108‑M1/140‑125 (MQ=255) gtgCTGGCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgccagcgcccatcagcgccgaaattcgcaaggtacatcagtatctgaccttttcg < 1:801966‑M1/140‑128 (MQ=255) tGGCGCATCgcgggcagtggcggtttcttcattttgcaagacctatcatatgaccggctgggaaggggggtattttgttgcgccagcgcccatcagcgccggaattcgcaagggacatcagtatcttaccttttcggtga > 2:420108‑M1/1‑9 (MQ=255) ggCGCATCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgccagcgcccatcagcgccgaaattcgcaaggtacatcagtatctgaccttttcggtgaa < 1:35249‑M1/140‑133 (MQ=255) aTCgcgggcagtggcggtttcttcatttggcaagacctatcatatgaccggctggaaagtgggttattgtgttgcgccagcgcccatcagcgccgaaattcgcaaggtacatcagtatctgaccttttcggtgaataccc < 1:948653‑M1/140‑138 (MQ=255) | TGGCAGCAGGCTGATTTCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCCGCAGCTGCGTGAGCGGGCAGTGGCGGTTTCTTCATTTGGCAAGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTT > NC_000913/634123‑634386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |