Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,640,748 IS5 (+) +4 bp intergenic (+206/‑191) yjjY → / → yjtD protein YjjY/putative rRNA methyltransferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)49 (1.140) 35/276 0.2 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 4640748 = 0 (0.000)intergenic (+206/‑194) yjjY/yjtD protein YjjY/putative rRNA methyltransferase
* ? NC_000913 = 2290113NA (NA)56 (1.310) 41/276 0.1 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 4640751 0 (0.000)intergenic (+209/‑191) yjjY/yjtD protein YjjY/putative rRNA methyltransferase

Only 100 of 103 total aligned reads displayed.

GCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACTTACGTTAAGAATTTGTAAATTCGCACCGCGTAA  >  NC_000913/4640609‑4640887
                                                                                                                                           |                                                                                                                                           
ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                                                             >  2:675605‑M2/140‑140 (MQ=255)
ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                                                             >  2:617900‑M2/140‑140 (MQ=255)
ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                                                             <  2:369305‑M2/1‑1 (MQ=255)
 gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                            <  2:411833‑M2/2‑1 (MQ=255)
 gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                            <  1:669239‑M2/2‑1 (MQ=255)
  ataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                           >  2:101159‑M2/138‑140 (MQ=255)
    aacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAg                                                                                                                                         >  2:20765‑M2/136‑140 (MQ=255)
     ttAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAgg                                                                                                                                        >  2:150019‑M2/1‑138 (MQ=255)
        ccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTaaa                                                                                                                                     <  2:609917‑M2/9‑1 (MQ=255)
         cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAAc                                                                                                                                    <  1:624173‑M2/10‑1 (MQ=255)
           gTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtg                                                                                                                                  >  2:356263‑M2/1‑132 (MQ=255)
             aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGaa                                                                                                                                <  1:96936‑M2/14‑1 (MQ=255)
              tgatgaAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcga                                                                                                                               <  2:348546‑M2/140‑12 (MQ=255)
               tggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAgg                                                                                                                              <  1:641116‑M2/16‑1 (MQ=255)
               gatgaAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaa                                                                                                                              >  2:705109‑M2/1‑128 (MQ=255)
                atgaAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaac                                                                                                                             >  1:496140‑M2/1‑127 (MQ=255)
                atgaAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaac                                                                                                                             >  1:474151‑M2/1‑127 (MQ=255)
                   gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAg                                                                                                                                  >  2:662575‑M2/121‑132 (MQ=255)
                   gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAg                                                                                                                                  <  1:662575‑M2/12‑1 (MQ=255)
                   gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGatat                                                                                                                          >  2:597771‑M2/121‑140 (MQ=255)
                   gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGatat                                                                                                                          >  1:115215‑M2/121‑140 (MQ=255)
                   aaaTCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaag                                                                                                                          >  2:501018‑M2/1‑124 (MQ=255)
                   aaaTCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaag                                                                                                                          >  1:282101‑M2/1‑124 (MQ=255)
                    aaTCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagt                                                                                                                         <  2:572161‑M2/140‑18 (MQ=255)
                      tcatcGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtcc                                                                                                                       >  2:142390‑M2/1‑121 (MQ=255)
                       catcGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccc                                                                                                                      >  1:236015‑M2/1‑120 (MQ=255)
                         acggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCa                                                                                                                    <  2:5342‑M2/26‑1 (MQ=255)
                           gTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgat                                                                                                                  >  2:668082‑M2/1‑116 (MQ=255)
                               taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCAtttttt                                                                                                              <  2:406547‑M2/32‑1 (MQ=255)
                                 aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTaa                                                                                                            <  1:345582‑M2/34‑1 (MQ=255)
                                 aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTaa                                                                                                            <  1:158328‑M2/34‑1 (MQ=255)
                                 aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTaa                                                                                                            >  1:235522‑M2/107‑140 (MQ=255)
                                 aaaTGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgaga                                                                                                            >  1:348546‑M2/1‑110 (MQ=255)
                                    tGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatca                                                                                                         <  1:275681‑M2/140‑34 (MQ=255)
                                      gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACt                                                                                                       >  2:267466‑M2/102‑140 (MQ=255)
                                      gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACt                                                                                                       >  1:32458‑M2/102‑140 (MQ=255)
                                      gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTAACAACTc                                                                                                      >  2:14796‑M2/102‑140 (MQ=255)
                                       ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTc                                                                                                      >  1:243057‑M2/101‑140 (MQ=255)
                                        tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCa                                                                                                     <  1:602880‑M2/41‑1 (MQ=255)
                                        aGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtt                                                                                                     <  2:520504‑M2/140‑38 (MQ=255)
                                         gCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                    <  1:580405‑M2/140‑39 (MQ=255)
                                          cTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                   >  2:606317‑M2/1‑101 (MQ=255)
                                          attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAAc                                                                                                   <  2:243057‑M2/43‑1 (MQ=255)
                                           ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAAcc                                                                                                  >  2:204206‑M2/97‑140 (MQ=255)
                                            tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCg                                                                                                 <  1:154416‑M2/45‑1 (MQ=255)
                                               gTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                                                              >  2:668945‑M2/1‑96 (MQ=255)
                                                ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgtgtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAg                                                                                             >  1:169689‑M2/92‑140 (MQ=255)
                                                  acaTTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                                                           >  1:496257‑M2/1‑93 (MQ=255)
                                                      tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGt                                                                                       <  2:425314‑M2/55‑1 (MQ=255)
                                                       attTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                      >  1:712443‑M2/1‑88 (MQ=255)
                                                          ttAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga                                                                                  >  1:474624‑M2/1‑84 (MQ=255)
                                                             ataatCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac                                                                                >  2:552743‑M2/1‑82 (MQ=255)
                                                             ataatCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac                                                                                >  1:556837‑M2/1‑82 (MQ=255)
                                                              aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAAt                                                                               >  2:459463‑M2/78‑140 (MQ=255)
                                                                  ccAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt                                                                           <  1:663167‑M2/140‑64 (MQ=255)
                                                                   cAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                                                          >  1:591410‑M2/1‑76 (MQ=255)
                                                                     cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAg                                                                        >  1:211490‑M2/71‑140 (MQ=255)
                                                                      ggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGc                                                                       <  2:171686‑M2/71‑1 (MQ=255)
                                                                         gTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                    >  1:296675‑M2/1‑70 (MQ=255)
                                                                         gTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                    >  1:147767‑M2/1‑70 (MQ=255)
                                                                          ttGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                   <  1:659031‑M2/140‑72 (MQ=255)
                                                                          ttGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                   <  1:52914‑M2/140‑72 (MQ=255)
                                                                            gCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag                                                                 <  2:333255‑M2/140‑74 (MQ=255)
                                                                            gCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag                                                                 <  1:134497‑M2/140‑74 (MQ=255)
                                                                             acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCtttttt                                                                <  2:62973‑M2/78‑1 (MQ=255)
                                                                                catACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                             <  1:637576‑M2/140‑78 (MQ=255)
                                                                                    cAACTGATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                                                         <  1:376848‑M2/140‑82 (MQ=255)
                                                                                     aaCTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact                                                        <  1:485672‑M2/140‑83 (MQ=255)
                                                                                       atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTa                                                      >  2:193697‑M2/53‑140 (MQ=255)
                                                                                         aataaACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc                                                    >  2:39847‑M2/1‑54 (MQ=255)
                                                                                           taaACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                  <  1:305930‑M2/140‑89 (MQ=255)
                                                                                            aaaCGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                 <  2:206326‑M2/140‑90 (MQ=255)
                                                                                                gtggtgAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagtcatagaacagggttcatcatgagtcatcaacttaccttcgccg                                             >  2:453417‑M2/1‑47 (MQ=255)
                                                                                                  ggtgAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac                                           <  1:616544‑M2/140‑96 (MQ=255)
                                                                                                  ggtgAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac                                           <  1:238936‑M2/140‑96 (MQ=255)
                                                                                                   gtgAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                          >  1:206326‑M2/1‑44 (MQ=255)
                                                                                                   gtgAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcataatgagtcatcaacttaccttcgccgaca                                          <  2:333487‑M2/140‑97 (MQ=255)
                                                                                                   agtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTc                                          >  1:648603‑M2/41‑140 (MQ=255)
                                                                                                        gccgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGa                                     >  1:628362‑M2/36‑140 (MQ=255)
                                                                                                          cgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACt                                   <  1:650961‑M2/107‑1 (MQ=255)
                                                                                                          cgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACt                                   <  1:597771‑M2/107‑1 (MQ=255)
                                                                                                          cgagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACt                                   <  1:562490‑M2/107‑1 (MQ=255)
                                                                                                           gagaagaatttccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACtt                                  >  2:423706‑M2/33‑140 (MQ=255)
                                                                                                                tCGAGATTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcag                             <  1:698342‑M2/140‑110 (MQ=255)
                                                                                                                  gagaTTTATTTTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta                           <  1:454683‑M2/140‑112 (MQ=255)
                                                                                                                     atttatttTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagc                        >  2:698342‑M2/1‑26 (MQ=255)
                                                                                                                      ccccgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACTTACGTTAAGAAtt                      <  1:14796‑M2/119‑1 (MQ=255)
                                                                                                                        tatttTTTATAAAATTATCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc                     <  2:69033‑M2/140‑118 (MQ=255)
                                                                                                                         cgcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACTTACGTTAAGAATTTg                    <  1:204206‑M2/122‑1 (MQ=255)
                                                                                                                          gcttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACTTACGTTAAGAATTTGt                   >  1:173705‑M2/18‑140 (MQ=255)
                                                                                                                           cttattcgcaccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACTTACGTTAAGAATTTGTa                  >  1:139033‑M2/17‑140 (MQ=255)
                                                                                                                                    accttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCACGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACTTACGTTAAGAATTTGTAAATTcgctc         <  2:384019‑M2/133‑3 (MQ=255)
                                                                                                                                     ccttccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACTTACGTTAAGAATTTGTAAATTCGCAcc        >  2:126480‑M2/7‑140 (MQ=255)
                                                                                                                                         ccCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACTTACGTTAAGAATTTGTAAATTCGCACCGCGt    >  1:368008‑M2/3‑140 (MQ=255)
                                                                                                                                          ccTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga   >  1:437571‑M2/1‑5 (MQ=255)
                                                                                                                                          ccTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga   >  1:330763‑M2/1‑5 (MQ=255)
                                                                                                                                          ccTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga   >  2:281302‑M2/1‑5 (MQ=255)
                                                                                                                                          ccTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga   >  1:507064‑M2/1‑5 (MQ=255)
                                                                                                                                          cCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGCCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACTTACGTTAAGAATTTGTAAATTCGCACCGCGTa   >  1:303398‑M2/2‑140 (MQ=255)
                                                                                                                                           cTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACTTACGTTAAGAATTTGTAAATTCGCACCGCGtaa  <  2:173705/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
GCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAAGGGCTTTTTCTGCGACTTACGTTAAGAATTTGTAAATTCGCACCGCGTAA  >  NC_000913/4640609‑4640887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.