mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 753,125 | 0 | T | A | 37.1% | 46.0 / 21.4 | 35 | intergenic (‑330/+60) | ybgD/gltA | putative fimbrial protein YbgD/citrate synthase |
| * | NC_000913 | 29,496 | 0 | T | A | 34.4% | 48.9 / 17.0 | 32 | intergenic (+301/‑155) | dapB/carA | 4‑hydroxy‑tetrahydrodipicolinate reductase/carbamoyl phosphate synthetase subunit alpha |
| * | NC_000913 | 1,068,173 | 0 | T | G | 31.2% | 47.1 / 11.5 | 32 | G31G (GGT→GGG) | ymdF | conserved protein YmdF |
| * | NC_000913 | 4,604,344 | 0 | C | T | 28.6% | 59.4 / 12.8 | 35 | S62F (TCT→TTT) | bglJ | DNA‑binding transcriptional regulator BglJ |
| * | NC_000913 | 753,105 | 0 | A | T | 27.9% | 86.5 / 14.8 | 43 | intergenic (‑310/+80) | ybgD/gltA | putative fimbrial protein YbgD/citrate synthase |
| * | NC_000913 | 3,531,440 | 0 | A | C | 24.2% | 137.4 / 17.7 | 62 | Y334D (TAT→GAT) | yhgE | putative transport protein YhgE |
| * | NC_000913 | 4,296,060 | 0 | C | T | 21.7% | 98.6 / 20.8 | 46 | intergenic (+266/+376) | gltP/yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |