BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1163010	115 (1.100)	3 (0.030)	3/272	8.9	2.6%	coding (373/642 nt)	lpoB	outer membrane lipoprotein ‑ activator of MrcB activity
*	?	NC_000913	1163014 =	115 (1.120)	3 (0.030)	3/272	8.9	2.6%	coding (377/642 nt)	lpoB	outer membrane lipoprotein ‑ activator of MrcB activity
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 119 total aligned reads displayed.

TGACTGGAATGGCGCAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTAAAGCCATAGGCATTGCCCGCAA  >  NC_000913/1162871‑1163146

        aTGGCGCAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAAt                                                                                                                                       >  1:1764731/1‑140 (MQ=255)

           gcgcAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATgcg                                                                                                                                    <  1:1624578/140‑1 (MQ=255)

           gcgcAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATgcg                                                                                                                                    <  1:682566/140‑1 (MQ=255)

           gcgcAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATgcg                                                                                                                                    <  2:1764731/140‑1 (MQ=255)

            cgcAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATgcgc                                                                                                                                   >  2:981086/1‑140 (MQ=255)

            cgcAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATgcgc                                                                                                                                   >  1:955871/1‑140 (MQ=255)

            cgcAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATgcgc                                                                                                                                   >  1:1324005/1‑140 (MQ=255)

            cgcAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATgcgc                                                                                                                                   >  1:1095732/1‑140 (MQ=255)

             gcAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATg                                                                                                                                      <  2:288690/136‑1 (MQ=255)

              cAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTg                                                                                                                                 >  2:423977/1‑140 (MQ=255)

              cAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTg                                                                                                                                 <  1:1312080/140‑1 (MQ=255)

               aaTGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTgg                                                                                                                                <  1:1373454/140‑1 (MQ=255)

                 tGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATgcg                                                                                                                                    <  2:1486957/134‑1 (MQ=255)

                 tGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATgcg                                                                                                                                    >  1:1486957/1‑134 (MQ=255)

                 tGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCt                                                                                                                              >  1:1655074/1‑140 (MQ=255)

                 tGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCt                                                                                                                              >  2:967107/1‑140 (MQ=255)

                 tGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCt                                                                                                                              >  1:1486240/1‑140 (MQ=255)

                      ccGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCtaataa                                                                                                                         >  1:350199/1‑140 (MQ=255)

                         aTGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACgg                                                                                                                      <  2:1655074/140‑1 (MQ=255)

                         aTGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACgg                                                                                                                      >  2:1081544/1‑140 (MQ=255)

                                gTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAAttt                                                                                                               >  2:895359/1‑140 (MQ=255)

                                    gATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTAccc                                                                                                           <  1:967107/140‑1 (MQ=255)

                                      tGCTTGGGGCTGACGGNGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTg                                                                                                         >  1:7188/1‑140 (MQ=255)

                                      tGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACgg                                                                                                                      <  2:1397802/127‑1 (MQ=255)

                                      tGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGAAAATTTACCCTg                                                                                                         >  2:1392029/1‑140 (MQ=255)

                                        cTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAAtt                                                                                                                <  1:778454/131‑1 (MQ=255)

                                        cTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAAtt                                                                                                                >  2:778454/1‑131 (MQ=255)

                                         ttGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACTGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGtt                                                                                                      >  1:912189/1‑140 (MQ=255)

                                           ggggCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTc                                                                                                    >  1:1141944/1‑140 (MQ=255)

                                           ggggCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTc                                                                                                    <  2:948032/140‑1 (MQ=255)

                                           ggggCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTc                                                                                                    >  2:70678/1‑140 (MQ=255)

                                               cTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGcc                                                                                                >  1:103601/1‑140 (MQ=255)

                                                  aCGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAg                                                                                             <  1:1386729/140‑1 (MQ=255)

                                                   cGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGc                                                                                            >  2:1188972/1‑140 (MQ=255)

                                                    ggggTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCa                                                                                           <  1:1650512/140‑1 (MQ=255)

                                                     gggTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCaa                                                                                          <  2:1531774/140‑1 (MQ=255)

                                                       gTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACt                                                                                        <  1:479430/140‑1 (MQ=255)

                                                                 gTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCg                                                                              >  2:1221491/1‑140 (MQ=255)

                                                                  tAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGa                                                                             >  1:1464325/1‑140 (MQ=255)

                                                                    gCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAg                                                                           <  2:1190684/140‑1 (MQ=255)

                                                                    gCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGG‑AATTTACCCTGGGTTCCGCCCAGCAACTGTCGGTTGCGAAGc                                                                          >  2:1668860/1‑140 (MQ=255)

                                                                      gTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCa                                                                         >  2:1650101/1‑140 (MQ=255)

                                                                         ctgctgGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGc                                                                          >  2:304849/1‑136 (MQ=255)

                                                                         ctgctgGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGc                                                                          <  1:304849/136‑1 (MQ=255)

                                                                          tgctgGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAg                                                                     >  2:701245/1‑140 (MQ=255)

                                                                               gTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑gg                                                           >  2:602090/1‑140 (MQ=255)

                                                                                ttGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGt                                                          >  2:1071419/1‑140 (MQ=255)

                                                                                  gATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGttt                                                        >  2:481464/1‑140 (MQ=255)

                                                                                   aTAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTg                                                       >  2:149416/1‑140 (MQ=255)

                                                                                    tAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGt                                                      <  2:350199/140‑1 (MQ=255)

                                                                                    tAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGt                                                      <  1:1188972/140‑1 (MQ=255)

                                                                                    tAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGt                                                      <  1:149416/140‑1 (MQ=255)

                                                                                         ttAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTcgccg                                                 >  1:1210610/1‑140 (MQ=255)

                                                                                         ttAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTcgccg                                                 >  2:1117613/1‑140 (MQ=255)

                                                                                         ttAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTcgccg                                                 <  1:1221491/140‑1 (MQ=255)

                                                                                         ttAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAAC‑‑‑GCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAg                                              >  2:856352/1‑140 (MQ=255)

                                                                                           aacaacCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCa                                               >  1:245928/1‑140 (MQ=255)

                                                                                             caacCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAgg                                             <  1:602090/140‑1 (MQ=255)

                                                                                             caacCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAgg                                             <  1:1061346/140‑1 (MQ=255)

                                                                                              aacCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGa                                            <  1:580165/140‑1 (MQ=255)

                                                                                              aacCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGa                                            <  2:1210610/140‑1 (MQ=255)

                                                                                              aacCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGa                                            >  1:413836/1‑140 (MQ=255)

                                                                                                 cGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAg                                         >  1:1721063/1‑140 (MQ=255)

                                                                                                   tACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTcgccg                                                 >  2:1014763/1‑130 (MQ=255)

                                                                                                   tACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTcgccg                                                 <  1:1014763/130‑1 (MQ=255)

                                                                                                    aCTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTCTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGttt                                      >  1:72758/1‑140 (MQ=255)

                                                                                                      tAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAg                                    <  2:413836/140‑1 (MQ=255)

                                                                                                      tAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTCTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAg                                    <  2:72758/140‑1 (MQ=255)

                                                                                                       aaCGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAgg                                   <  2:1486240/140‑1 (MQ=255)

                                                                                                        aCGGTTCGCTGAATACCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACGCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGc                                  >  1:1527629/1‑140 (MQ=255)

                                                                                                           gTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCAcc                               <  1:599502/140‑1 (MQ=255)

                                                                                                           gTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCAcc                               <  2:1721063/140‑1 (MQ=255)

                                                                                                            ttCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCAccc                              <  1:146712/140‑1 (MQ=255)

                                                                                                             tCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAgg                                   <  2:124402/134‑1 (MQ=255)

                                                                                                             tCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCg                             <  1:882784/140‑1 (MQ=255)

                                                                                                              cGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAgg                                   >  1:1734549/1‑133 (MQ=255)

                                                                                                              cGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAgg                                   <  2:1734549/133‑1 (MQ=255)

                                                                                                              cGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCgt                            >  1:526712/1‑140 (MQ=255)

                                                                                                              cGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCgt                            >  2:1566324/1‑140 (MQ=255)

                                                                                                              cGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCg                             <  2:237325/139‑1 (MQ=255)

                                                                                                              cGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCg                             >  1:237325/1‑139 (MQ=255)

                                                                                                              cGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCg                             <  2:746864/139‑1 (MQ=255)

                                                                                                              cGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCg                             <  2:71238/139‑1 (MQ=255)

                                                                                                              cGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCg                             >  1:71238/1‑139 (MQ=255)

                                                                                                              cGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCg                             >  1:746864/1‑139 (MQ=255)

                                                                                                               gCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCgta                           >  1:1570082/1‑140 (MQ=255)

                                                                                                                cTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTAGGTTTGGTTTGTCGCCGCAGGACAGTTTAGGCAcc                               <  1:1081544/140‑1 (MQ=255)

                                                                                                                cTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCgtag                          <  1:517960/140‑1 (MQ=255)

                                                                                                                  gAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCgtagta                        <  1:985802/140‑1 (MQ=255)

                                                                                                                  gAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCgtagta                        <  2:24902/140‑1 (MQ=255)

                                                                                                                  gAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCgtagta                        <  1:1117613/140‑1 (MQ=255)

                                                                                                                  gAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCgtagta                        <  1:1201927/140‑1 (MQ=255)

                                                                                                                  gAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCgtagta                        <  1:1392029/140‑1 (MQ=255)

                                                                                                                   aaTGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGGAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTaa                       <  2:955871/140‑1 (MQ=255)

                                                                                                                   aaTGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTaa                       <  1:1566324/140‑1 (MQ=255)

                                                                                                                      gCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTAAAGc                    >  2:746161/1‑140 (MQ=255)

                                                                                                                          cAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTAAAGCCATa                >  2:591858/1‑140 (MQ=255)

                                                                                                                              aGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTAAAGCCATAGGCa            <  1:423977/140‑1 (MQ=255)

                                                                                                                               gCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTAAAGCCATAGGCAt           <  1:895359/140‑1 (MQ=255)

                                                                                                                                        aCGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTAAAGCCATAGGCATTGCCCGCaa  <  2:103601/140‑1 (MQ=255)

TGACTGGAATGGCGCAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTA‑‑‑‑‑GGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTAAAGCCATAGGCATTGCCCGCAA  >  NC_000913/1162871‑1163146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.