BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3617431 =	133 (0.850)	4 (0.030)	4/250	9.8	2.9%	coding (417/765 nt)	nikD	Ni(2(+)) ABC transporter ATP binding subunit NikD
*	?	NC_000913	3617751 =	144 (1.010)	4 (0.030)	4/250	9.8	2.9%	coding (737/765 nt)	nikD	Ni(2(+)) ABC transporter ATP binding subunit NikD
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 145 total aligned reads displayed.

GATATGGGCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTCCCTGACCCTGAAAA  >  NC_000913/3617612‑3617884

 atatGGGCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGcc                                                                                                                                      <  1:819311/140‑1 (MQ=255)

 atatGGGCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGcc                                                                                                                                      <  1:1730571/140‑1 (MQ=255)

   atGGGCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCct                                                                                                                                    <  2:155628/140‑1 (MQ=255)

    tGGGCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGcc                                                                                                                                      <  1:2180767/137‑1 (MQ=255)

    tGGGCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGcc                                                                                                                                      >  2:2180767/1‑137 (MQ=255)

      ggCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTTGCGGTAAGAATTTCGAACAGGGGGGTGTAGAAAAGCTGTTTAACCCCCCCCAACATACAGTGGCGCGCAGCCTTGTTTCCGCTCATCTCCCCccctc                                                                                                                                 >  2:1089615/1‑139 (MQ=255)

      ggCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTa                                                                                                                                 >  2:2159229/1‑140 (MQ=255)

      ggCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTa                                                                                                                                 >  1:2017102/1‑140 (MQ=255)

      ggCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTa                                                                                                                                 >  1:2063931/1‑140 (MQ=255)

      ggCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTa                                                                                                                                 <  2:2017102/140‑1 (MQ=255)

      ggCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTa                                                                                                                                 <  1:807345/140‑1 (MQ=255)

       gCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGcc                                                                                                                                      >  1:1666432/1‑134 (MQ=255)

       gCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGcc                                                                                                                                      <  2:1666432/134‑1 (MQ=255)

         gTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGGAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACgg                                                                                                                              >  1:1823950/1‑140 (MQ=255)

           tgtgGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTGAGATTGTCGAACAGGGGGGTGTAGAAACGCTGTTTAACGCCCCCCAACATACAGTGACGCGCCGCCTGGGTTCCCCTCATCTCGCCCTCTACGGTa                                                                                                                            >  2:2060175/1‑140 (MQ=255)

           tgtgGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGGAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGGTTCCCCTCATCTCGCCCTCTACggga                                                                                                                            >  2:1522636/1‑138 (MQ=255)

            gtgGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGGGGTGTAGAAAAGCTGTTTTAAGCCCCCCAAAATACAGTGACGCGCAGCCTGGGTTTCGCTCATCTCGCCCTCTACGGGAt                                                                                                                           >  2:2434014/1‑140 (MQ=255)

            gtgGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGGAAGATTGTCGAACAGGGCGATGTAGAAACGGTGTTTTACGCCCCCCAACATACAGTGAAGCGCAGCCTGGTTTTCGCTCATCTCGCCCTCTACGGGAt                                                                                                                           >  2:566319/1‑140 (MQ=255)

             tgGCGCGTCTGGCGGATGACGTGGCGGAGATGTCTTACCGTAAGGATGTCGGACAGGGCGATGTAGAAACGCCGTTTTACGCCCCCAAACAAACAATGACGCCGAGCCCGGGTTCCCCTCATCTCCCCCTCTACCGTATg                                                                                                                          >  2:152095/1‑140 (MQ=255)

                cgcgTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAg                                                                                                                       <  1:1963406/140‑1 (MQ=255)

                  cgTCTGGCGGATGACGTGGCGGTGGTGTCTGACGGGAAGATTTTCGCAGAGGGGGGTGTAGAAAAGCTTTTTAAAGCCCCCCAACATTCACGGACGCGCAGCCTGGTTTCCGCCCATCTCGCCCTCTACGGGATGGAGCt                                                                                                                     >  2:2168928/1‑140 (MQ=255)

                  cgTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTa                                                                                                                                 <  1:828645/128‑1 (MQ=255)

                  cgTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTa                                                                                                                                 >  2:828645/1‑128 (MQ=255)

                  cgTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCt                                                                                                                     >  1:1726181/1‑140 (MQ=255)

                   gTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTg                                                                                                                    <  1:1814278/140‑1 (MQ=255)

                    tCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTgg                                                                                                                   <  1:337814/140‑1 (MQ=255)

                       ggCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGcat                                                                                                                <  2:2198935/140‑1 (MQ=255)

                             tGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTG‑TTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACt                                                                                                         <  1:879776/140‑1 (MQ=255)

                              gACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACt                                                                                                         <  1:152095/140‑1 (MQ=255)

                              gACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACt                                                                                                         >  2:2463147/1‑140 (MQ=255)

                               aCGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACtt                                                                                                        <  1:2168928/140‑1 (MQ=255)

                                    gCGGTGGTGTGCGACGGGAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACCGGCGGCCGGGGTTTCTCTCATCTCCCCCTCTACGGTATGGAGGTGGCATCATGACTTTACtt                                                                                                   >  2:1940623/1‑140 (MQ=255)

                                      ggTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTaa                                                                                                 <  1:1587788/140‑1 (MQ=255)

                                          aTGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACtt                                                                                                        <  1:2061168/129‑1 (MQ=255)

                                          aTGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACtt                                                                                                        >  2:2061168/1‑129 (MQ=255)

                                          aTGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCCGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACAtc                                                                                             >  2:277617/1‑140 (MQ=255)

                                               tGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCgg                                                                                        >  1:556768/1‑140 (MQ=255)

                                               tGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCgg                                                                                        <  1:2434014/140‑1 (MQ=255)

                                                gACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGc                                                                                       <  1:1522636/140‑1 (MQ=255)

                                                 aCGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGcc                                                                                      <  1:2463147/140‑1 (MQ=255)

                                                 aCGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGcc                                                                                      <  1:1181224/140‑1 (MQ=255)

                                                 aCGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGcc                                                                                      <  2:238754/140‑1 (MQ=255)

                                                 aCGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCCCCGGcc                                                                                      >  1:891123/1‑140 (MQ=255)

                                                 aCGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCCCCGGcc                                                                                      <  2:891123/140‑1 (MQ=255)

                                                   ggTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCGCCGGCCtt                                                                                    <  2:330372/140‑1 (MQ=255)

                                                       aGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTccc                                                                                <  2:1726181/140‑1 (MQ=255)

                                                       aGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTccc                                                                                >  1:26487/1‑140 (MQ=255)

                                                       aGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGCTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTccc                                                                                >  1:2483586/1‑140 (MQ=255)

                                                        gATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCa                                                                               >  1:2459295/1‑140 (MQ=255)

                                                        gATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGCTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCa                                                                               <  2:2483586/140‑1 (MQ=255)

                                                           tGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGcc                                                                                      <  2:2262236/130‑1 (MQ=255)

                                                               gAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTAt                                                                        <  1:1089615/140‑1 (MQ=255)

                                                               gAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTAt                                                                        >  1:2466113/1‑140 (MQ=255)

                                                                   aGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATgcgc                                                                    >  1:661391/1‑140 (MQ=255)

                                                                    gggCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCa                                                                   >  2:556770/1‑140 (MQ=255)

                                                                     ggCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCAc                                                                  >  2:1401082/1‑140 (MQ=255)

                                                                     ggCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCAc                                                                  <  1:411710/140‑1 (MQ=255)

                                                                       cGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATgcg                                                                     >  2:1734371/1‑135 (MQ=255)

                                                                       cGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTAGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCa                                                                   >  2:2439703/1‑137 (MQ=255)

                                                                       cGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTAGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCa                                                                   <  1:2439703/137‑1 (MQ=255)

                                                                        gATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGt                                                               <  1:679776/140‑1 (MQ=255)

                                                                        gATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGt                                                               <  1:1445950/140‑1 (MQ=255)

                                                                                    cTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACg                                                                 <  1:820369/126‑1 (MQ=255)

                                                                                    cTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACg                                                                 >  2:820369/1‑126 (MQ=255)

                                                                                    cTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGa                                                   >  1:1868043/1‑140 (MQ=255)

                                                                                     tGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGaa                                                  <  1:223169/140‑1 (MQ=255)

                                                                                      gTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGaaa                                                 <  1:323846/140‑1 (MQ=255)

                                                                                          aaCGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAaacat                                             <  2:1868043/140‑1 (MQ=255)

                                                                                            cGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAaacatca                                           >  2:1675129/1‑140 (MQ=255)

                                                                                                    aaCATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAgg                                   <  2:519068/140‑1 (MQ=255)

                                                                                                    aaCATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAgg                                   <  2:2614900/140‑1 (MQ=255)

                                                                                                    aaCATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAgg                                   <  1:556770/140‑1 (MQ=255)

                                                                                                    aaCATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAgg                                   <  2:1399300/140‑1 (MQ=255)

                                                                                                      cATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCg                                 <  1:2359187/140‑1 (MQ=255)

                                                                                                      cATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCg                                 <  1:1401082/140‑1 (MQ=255)

                                                                                                         aCAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGt                               >  2:1251392/1‑139 (MQ=255)

                                                                                                         aCAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGt                               <  1:1251392/139‑1 (MQ=255)

                                                                                                         aCAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTg                              <  1:277617/140‑1 (MQ=255)

                                                                                                             tGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTg                              >  1:516183/1‑136 (MQ=255)

                                                                                                             tGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTg                              <  2:516183/136‑1 (MQ=255)

                                                                                                              gACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGaa                         >  2:19366/1‑140 (MQ=255)

                                                                                                               aCGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAgg                                   >  2:689471/1‑129 (MQ=255)

                                                                                                               aCGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAgg                                   >  1:476746/1‑129 (MQ=255)

                                                                                                               aCGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAgg                                   <  2:476746/129‑1 (MQ=255)

                                                                                                               aCGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAAt                        >  1:1000760/1‑140 (MQ=255)

                                                                                                                cgcgCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATa                       >  2:187902/1‑140 (MQ=255)

                                                                                                                cgcgCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATa                       >  2:813383/1‑140 (MQ=255)

                                                                                                                cgcgCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATa                       >  2:1207330/1‑140 (MQ=255)

                                                                                                                cgcgCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTCTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATa                       >  2:224279/1‑140 (MQ=255)

                                                                                                                  cgcAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAAc                     >  1:1574201/1‑140 (MQ=255)

                                                                                                                    cAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGt                   <  1:19366/140‑1 (MQ=255)

                                                                                                                       ccTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTc                >  2:1235990/1‑140 (MQ=255)

                                                                                                                       ccTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTc                >  1:80102/1‑140 (MQ=255)

                                                                                                                         tGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTccc              <  2:2459295/140‑1 (MQ=255)

                                                                                                                         tGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTccc              <  1:187902/140‑1 (MQ=255)

                                                                                                                         tGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTccc              <  2:80102/140‑1 (MQ=255)

                                                                                                                         tGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTCTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTccc              <  1:224279/140‑1 (MQ=255)

                                                                                                                            tttCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTccctga           <  1:1675129/140‑1 (MQ=255)

                                                                                                                            tttCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTccctga           <  1:1300478/140‑1 (MQ=255)

                                                                                                                              tCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTccctgacc         <  1:1636379/140‑1 (MQ=255)

GATATGGGCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTCCCTGACCCTGAAAA  >  NC_000913/3617612‑3617884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.