mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,296,060 | 0 | C | T | 41.7% | 17.3 / 23.6 | 24 | intergenic (+266/+376) | gltP/yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| * | NC_000913 | 4,604,344 | 0 | C | T | 34.2% | 50.1 / 14.5 | 38 | S62F (TCT→TTT) | bglJ | DNA‑binding transcriptional regulator BglJ |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1625739 | 31 (0.800) | 4 (0.110) | 4/266 | 3.4 | 11.6% | coding (1642/2046 nt) | dcp | peptidyl‑dipeptidase Dcp |
| ? | NC_000913 | 1625745 = | 31 (0.840) | coding (1636/2046 nt) | dcp | peptidyl‑dipeptidase Dcp | |||||