New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 608010 =NA (NA)56 (0.840) 40/274 0.5 94.9% noncoding (4/1345 nt) IS186 repeat region
?NC_000913 = 1503204 3 (0.050)noncoding (44/1748 nt) IS609 repeat region

Only 100 of 123 total aligned reads displayed.

AACAAGTTATTGATGACATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTGTAGTAATACCTGAATGCAATATC  >  NC_000913/1503067‑1503343
                                                                                                                                         |                                                                                                                                           
gtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGgcg                                                                                                                                           <  2:352053‑M2/9‑1 (MQ=255)
  cAAGTTATTGATGACATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcata                                                                                                                                         >  1:967997‑M2/1‑136 (MQ=255)
   gccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCgg                                                                                                                                        >  2:47015‑M2/129‑140 (MQ=255)
   gccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCgg                                                                                                                                        >  2:878624‑M2/129‑140 (MQ=255)
     gTTATTGATGACATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagc                                                                                                                                      <  2:1114541‑M2/140‑8 (MQ=255)
     gTTATTGATGACATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcat                                                                                                                                          >  2:509586‑M2/1‑133 (MQ=255)
        tcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTc                                                                                                                                   >  2:288456‑M2/124‑140 (MQ=255)
        aTTGATGACATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgct                                                                                                                                   >  1:401293‑M2/1‑130 (MQ=255)
          gtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCa                                                                                                                                 <  2:722240‑M2/19‑1 (MQ=255)
           tgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCAc                                                                                                                                <  1:829960‑M2/20‑1 (MQ=255)
           tgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCAc                                                                                                                                <  1:288456‑M2/20‑1 (MQ=255)
               aCATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaa                                                                                                                            <  2:730272‑M2/140‑18 (MQ=255)
               aCATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaa                                                                                                                            >  1:138989‑M2/1‑123 (MQ=255)
                cATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaag                                                                                                                           <  1:692443‑M2/140‑19 (MQ=255)
                 aTGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagg                                                                                                                          <  1:666064‑M2/140‑20 (MQ=255)
                  tGGCGACCGATGCCACCATGTTTGGCGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGtataagcgctaacttaaggg                                                                                                                         >  2:813959‑M2/1‑120 (MQ=255)
                  tGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaaggg                                                                                                                         >  1:1114541‑M2/1‑120 (MQ=255)
                   tatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCAc                                                                                                                                <  1:1063084‑M2/20‑1 (MQ=255)
                   tatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCAc                                                                                                                                >  2:1063084‑M2/113‑132 (MQ=255)
                   tatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAg                                                                                                                        >  2:817746‑M2/113‑140 (MQ=255)
                   ggCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgc                                                                                                                                    <  2:219228‑M2/128‑10 (MQ=255)
                   ggCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgc                                                                                                                                    >  1:219228‑M2/1‑119 (MQ=255)
                      gACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgt                                                                                                                     >  1:730272‑M2/1‑116 (MQ=255)
                            tGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtatt                                                                                                               >  2:666064‑M2/1‑110 (MQ=255)
                            acagcctacaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCt                                                                                                               <  1:213909‑M2/37‑1 (MQ=255)
                               cctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTg                                                                                                                 <  2:288331‑M2/35‑1 (MQ=255)
                               cctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTg                                                                                                                 >  1:288331‑M2/101‑135 (MQ=255)
                               cctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCtgtt                                                                                                            >  1:387603‑M2/101‑140 (MQ=255)
                               cctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCtg                                                                                                              <  1:347510‑M2/38‑1 (MQ=255)
                                    aaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCa                                                                                                       <  1:47015‑M2/45‑1 (MQ=255)
                                     gTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgat                                                                                                      >  2:126942‑M2/1‑101 (MQ=255)
                                      tttGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctg                                                                                                        <  1:1113140‑M2/137‑38 (MQ=255)
                                               aaCAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaac                                                                                            >  1:1086909‑M2/1‑91 (MQ=255)
                                                 agaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGa                                                                                          <  1:1129849‑M2/58‑1 (MQ=255)
                                                     aaGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccg                                                                                      >  2:368186‑M2/1‑85 (MQ=255)
                                                     aaGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccg                                                                                      >  2:402534‑M2/1‑85 (MQ=255)
                                                     aaGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtagtattacgcctgatatgatttaacgtgccg                                                                                      >  1:480799‑M2/1‑85 (MQ=255)
                                                       cgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGa                                                                                          <  2:705668‑M2/58‑1 (MQ=255)
                                                       cgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGa                                                                                          >  1:705668‑M2/77‑134 (MQ=255)
                                                       cgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACgg                                                                                    >  1:266507‑M2/77‑140 (MQ=255)
                                                       cgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACgg                                                                                    >  2:257475‑M2/77‑140 (MQ=255)
                                                           ttCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaat                                                                                <  1:797435‑M2/140‑62 (MQ=255)
                                                           ttCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgccaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaat                                                                                >  2:567825‑M2/1‑79 (MQ=255)
                                                               aGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattact                                                                            >  2:797435‑M2/1‑75 (MQ=255)
                                                               aGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattact                                                                            >  2:911190‑M2/1‑75 (MQ=255)
                                                                gtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGgcg                                                                           >  1:366601‑M2/68‑140 (MQ=255)
                                                                gtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGgcg                                                                           <  1:843102‑M2/73‑1 (MQ=255)
                                                                gACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactc                                                                           <  1:486997‑M2/140‑67 (MQ=255)
                                                                  cttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCa                                                                         <  1:257475‑M2/75‑1 (MQ=255)
                                                                    cgcCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaat                                                                                <  2:1002923‑M2/131‑62 (MQ=255)
                                                                    cgcCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaat                                                                                >  1:1002923‑M2/1‑70 (MQ=255)
                                                                         tCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataa                                                                  >  1:536806‑M2/1‑65 (MQ=255)
                                                                         aggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCAc                                                                        <  1:258890‑M2/76‑1 (MQ=255)
                                                                         aggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCAc                                                                        >  2:258890‑M2/59‑134 (MQ=255)
                                                                            caccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGc                                                               >  1:372940‑M2/56‑140 (MQ=255)
                                                                                gaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACt                                                           <  1:977607‑M2/89‑1 (MQ=255)
                                                                                     gcTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaat                                                      <  1:261213‑M2/140‑88 (MQ=255)
                                                                                      tcgcattcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCaaa                                                     >  1:380246‑M2/46‑140 (MQ=255)
                                                                                      cTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaatt                                                     <  1:364988‑M2/140‑89 (MQ=255)
                                                                                         tttATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctg                                                  >  2:261213‑M2/1‑49 (MQ=255)
                                                                                           ttcttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGc                                                <  2:380246‑M2/100‑1 (MQ=255)
                                                                                           tATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggc                                                >  2:486997‑M2/1‑47 (MQ=255)
                                                                                           tATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggc                                                >  1:415629‑M2/1‑47 (MQ=255)
                                                                                              ttcagatggttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAg                                             >  1:738275‑M2/38‑140 (MQ=255)
                                                                                                  tGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggccc                                              >  2:595961‑M2/1‑40 (MQ=255)
                                                                                                  tGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggccc                                              <  1:595961‑M2/135‑96 (MQ=255)
                                                                                                      gttcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCcac                                     >  1:1048155‑M2/30‑140 (MQ=255)
                                                                                                        tcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACaa                                   >  1:600371‑M2/28‑140 (MQ=255)
                                                                                                        tcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACaa                                   >  2:801299‑M2/28‑140 (MQ=255)
                                                                                                        tcaacccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACaa                                   >  1:1076926‑M2/28‑140 (MQ=255)
                                                                                                           acccttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAAc                                <  2:134881‑M2/116‑1 (MQ=255)
                                                                                                               ttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCt                            <  1:817746‑M2/120‑1 (MQ=255)
                                                                                                               ttaagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATCGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCt                            >  2:972660‑M2/21‑140 (MQ=255)
                                                                                                                taagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATCGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCtt                           <  1:972660‑M2/121‑1 (MQ=255)
                                                                                                                 aagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCttt                          <  2:738275‑M2/122‑1 (MQ=255)
                                                                                                                 aagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCttt                          >  2:685158‑M2/19‑140 (MQ=255)
                                                                                                                 aagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCttt                          >  2:875071‑M2/19‑140 (MQ=255)
                                                                                                                 aagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCttt                          >  2:32670‑M2/19‑140 (MQ=255)
                                                                                                                 aagttagcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCttt                          <  1:801299‑M2/122‑1 (MQ=255)
                                                                                                                   tCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaact                        <  1:566412‑M2/140‑118 (MQ=255)
                                                                                                                   tCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaact                        <  1:433653‑M2/140‑118 (MQ=255)
                                                                                                                   tCCTTCAGGGCGGGGATATAAGGcataagcgctaacttaagggctgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaact                        <  2:615817‑M2/140‑118 (MQ=255)
                                                                                                                      agcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTgtagt                     >  1:286267‑M2/14‑140 (MQ=255)
                                                                                                                      agcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTgtagt                     >  1:684278‑M2/14‑140 (MQ=255)
                                                                                                                      agcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTgtagt                     >  2:675380‑M2/14‑140 (MQ=255)
                                                                                                                      agcgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTgtagt                     <  1:878624‑M2/127‑1 (MQ=255)
                                                                                                                        cgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTGTAGTaa                   >  2:117214‑M2/12‑140 (MQ=255)
                                                                                                                        cgcttatgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTGTAGTaa                   >  1:89947‑M2/12‑140 (MQ=255)
                                                                                                                          gggCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatact                 >  2:414462‑M2/1‑16 (MQ=255)
                                                                                                                           ggCGGGGATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatactt                <  2:1043116‑M2/140‑126 (MQ=255)
                                                                                                                             atgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTGTAGTAATACCt              >  2:220181‑M2/7‑140 (MQ=255)
                                                                                                                              tgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTGTAGTAATACCTg             <  1:675380‑M2/135‑1 (MQ=255)
                                                                                                                              tgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTGTAGTAATACCTg             <  2:708128‑M2/135‑1 (MQ=255)
                                                                                                                              tgggaTATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTGTAGTAATACCTg             <  2:266507‑M2/135‑1 (MQ=255)
                                                                                                                              ggggATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcgg             >  2:364988‑M2/1‑12 (MQ=255)
                                                                                                                                ggATATAAGGcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggca           <  2:1040582‑M2/140‑131 (MQ=255)
                                                                                                                                     taAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTGTAGTAATACCTGAATGTaa      >  1:343718/1‑140 (MQ=255)
                                                                                                                                     taAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTGTAGTAATACCTGAATGCaa      >  1:814236/1‑140 (MQ=255)
                                                                                                                                         gcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgcc  <  2:653855‑M2/140‑140 (MQ=255)
                                                                                                                                         gcataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgcc  >  2:566412‑M2/1‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                           
AACAAGTTATTGATGACATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAGTTCCAGACGCGCCATCGTTAGATGGCGCTTTTTATCCGGTGCGCCGTAAAACCCCATCCTTCAGGGCGGGGATATAAGGCGCGGTTTTCCACCTGACCAGGTGTTTGCTGTTGTTCAATGTATTGGCGGATGACGGATATTGGCGCACCTCCGCAGCTACTGGCAAAATAGCCAGGACTCCACAAAACGCCTTTGTAGTAATACCTGAATGCAATATC  >  NC_000913/1503067‑1503343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.