Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 584,565 IS1 (–) +9 bp intergenic (+135/+107) appY → / ← ompT DNA‑binding transcriptional activator AppY/outer membrane protease VII (outer membrane protein 3b)

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 258675NA (NA)48 (0.850) 36/276 0.4 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 584565 = 0 (0.000)intergenic (+135/+115) appY/ompT DNA‑binding transcriptional activator AppY/outer membrane protease VII (outer membrane protein 3b)
* ? NC_000913 = 5845730 (0.000)78 (1.380) 52/276 0.1 100% intergenic (+143/+107) appY/ompT DNA‑binding transcriptional activator AppY/outer membrane protease VII (outer membrane protein 3b)
?NC_000913 = 1050545 NA (NA)noncoding (768/768 nt) IS1 repeat region

Only 100 of 132 total aligned reads displayed.

TTTATTACAAGTTGTCTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGAT  >  NC_000913/584436‑584712
                                                                                                                                         |                                                                                                                                           
tttATTACAAGTTGTCTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATgg                                                                                                                                           >  1:812538‑M1/1‑138 (MQ=255)
      cttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTtaa                                                                                                                                     >  2:367453‑M2/124‑140 (MQ=255)
         aGTTGTCTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactc                                                                                                                                  >  1:560757‑M1/1‑129 (MQ=255)
          gTTGTCTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactcc                                                                                                                                 >  1:737943‑M1/1‑128 (MQ=255)
          gTTGTCTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactcc                                                                                                                                 <  1:428136‑M1/140‑13 (MQ=255)
          gTTGTCTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactcc                                                                                                                                 >  1:403436‑M1/1‑128 (MQ=255)
          gTTGTCTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactcc                                                                                                                                 <  2:763292‑M1/140‑13 (MQ=255)
          gTTGTCTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactcc                                                                                                                                 >  2:305872‑M1/1‑128 (MQ=255)
          gTTGTCTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactcc                                                                                                                                 <  2:812538‑M1/140‑13 (MQ=255)
          gTTGTCTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaat                                                                                                                                       <  1:100334‑M1/134‑7 (MQ=255)
          gTTGTCTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaat                                                                                                                                       >  2:100334‑M1/1‑128 (MQ=255)
            ccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCt                                                                                                                               <  2:218842‑M2/23‑1 (MQ=255)
               cTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaactt                                                                                                                            >  1:907002‑M1/1‑123 (MQ=255)
                     gTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgat                                                                                                                      <  2:696227‑M1/140‑24 (MQ=255)
                     gTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgat                                                                                                                      >  1:461396‑M1/1‑117 (MQ=255)
                        aaTTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagt                                                                                                                   >  1:578270‑M1/1‑114 (MQ=255)
                           ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTa                                                                                                                <  1:308458‑M2/38‑1 (MQ=255)
                           ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTa                                                                                                                <  1:249942‑M2/38‑1 (MQ=255)
                                tattatACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatg                                                                                                           >  1:354871‑M1/1‑106 (MQ=255)
                                  ttatACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgtt                                                                                                         <  2:907002‑M1/140‑37 (MQ=255)
                                  ttatACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgtt                                                                                                         <  1:489431‑M1/140‑37 (MQ=255)
                                   agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTaa                                                                                                        <  1:446075‑M2/46‑1 (MQ=255)
                                     taCAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcag                                                                                                      >  2:551502‑M1/1‑101 (MQ=255)
                                     taCAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactcaaacttattgatagtgttttatgttcag                                                                                                      >  2:213464‑M1/1‑101 (MQ=255)
                                        aGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagata                                                                                                   >  2:63057‑M1/1‑98 (MQ=255)
                                        aGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagata                                                                                                   >  2:565641‑M1/1‑98 (MQ=255)
                                          cGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataat                                                                                                 >  2:298807‑M1/1‑96 (MQ=255)
                                          cGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataat                                                                                                 >  1:385591‑M1/1‑96 (MQ=255)
                                          cGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataat                                                                                                 >  2:765958‑M1/1‑96 (MQ=255)
                                          cGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataat                                                                                                 >  2:943548‑M1/1‑96 (MQ=255)
                                            ttttttttGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                                                               >  1:179437‑M1/1‑94 (MQ=255)
                                              ttttttGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                                                             <  1:305872‑M1/140‑49 (MQ=255)
                                                ttttGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccga                                                                                           <  2:385591‑M1/140‑51 (MQ=255)
                                                 gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGaaa                                                                                          <  2:864750‑M2/60‑1 (MQ=255)
                                                 gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGaaa                                                                                          <  2:351493‑M2/60‑1 (MQ=255)
                                                   tGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga                                                                                        <  1:487232‑M1/140‑54 (MQ=255)
                                                     gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGc                                                                                      <  2:902035‑M2/64‑1 (MQ=255)
                                                                     gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCgggg                                                                      <  2:240690‑M2/80‑1 (MQ=255)
                                                                     ccATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGCTGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca                                                                      >  1:469329‑M1/1‑69 (MQ=255)
                                                                     ccATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca                                                                      <  2:524102‑M1/140‑72 (MQ=255)
                                                                       aTTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc                                                                    >  1:567871‑M1/1‑67 (MQ=255)
                                                                        ttAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg                                                                   >  1:601230‑M1/1‑66 (MQ=255)
                                                                        actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGa                                                                   >  2:423288‑M2/58‑140 (MQ=255)
                                                                           aTTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt                                                                <  2:48040‑M1/140‑78 (MQ=255)
                                                                           aTTTGTAATTGGGTTACTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt                                                                <  2:452006‑M1/140‑78 (MQ=255)
                                                                            tttGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt                                                               >  1:853961‑M1/1‑62 (MQ=255)
                                                                             agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGCTATTTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTc                                                              >  2:739054‑M2/53‑140 (MQ=255)
                                                                                acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCAcc                                                           >  1:893137‑M2/50‑140 (MQ=255)
                                                                                  aTTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa                                                         <  2:354871‑M1/140‑85 (MQ=255)
                                                                                   ttGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgtccgatgactttgtcatgcagctccaccgattttgagaac                                                        <  2:560757‑M1/140‑86 (MQ=255)
                                                                                    tGGGTTGCTGTCGCCTATTTTATACATACTATGATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacg                                                       <  2:857715‑M1/140‑87 (MQ=255)
                                                                                      ggTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                     >  1:329895‑M1/1‑52 (MQ=255)
                                                                                        ttGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag                                                   <  1:692939‑M1/140‑91 (MQ=255)
                                                                                         tGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                  <  2:287831‑M1/140‑92 (MQ=255)
                                                                                          gCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg                                                 >  1:619528‑M1/1‑48 (MQ=255)
                                                                                                gCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc                                           >  1:693443‑M1/1‑42 (MQ=255)
                                                                                                gCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc                                           >  2:22264‑M1/1‑42 (MQ=255)
                                                                                                    cactaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGc                                       <  1:822224‑M2/111‑1 (MQ=255)
                                                                                                     actaaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCg                                      <  2:287638‑M2/112‑1 (MQ=255)
                                                                                                      tttATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccca                                     <  2:588224‑M1/140‑105 (MQ=255)
                                                                                                       ttATACATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccag                                    <  1:63057‑M1/140‑106 (MQ=255)
                                                                                                       taaatcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGtt                                    >  1:811281‑M2/27‑140 (MQ=255)
                                                                                                        tataCATACTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagc                                   <  1:765958‑M1/140‑107 (MQ=255)
                                                                                                          tacatacTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccg                                 >  1:451212‑M1/1‑32 (MQ=255)
                                                                                                          atcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCtt                                 <  1:265417‑M2/117‑1 (MQ=255)
                                                                                                          atcagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTCTCACCTCGGGGAAATTTTAGTTGGCGTTCtt                                 <  2:800864‑M2/117‑1 (MQ=255)
                                                                                                            catacTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtg                               <  2:451212‑M1/140‑111 (MQ=255)
                                                                                                            cagtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTaa                               >  1:119133‑M2/22‑140 (MQ=255)
                                                                                                             agtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTaaa                              <  2:798640‑M2/120‑1 (MQ=255)
                                                                                                             agtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTaaa                              <  2:391408‑M2/120‑1 (MQ=255)
                                                                                                             agtaagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTaaa                              <  1:226695‑M2/120‑1 (MQ=255)
                                                                                                               taagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAAt                            >  2:307941‑M2/19‑140 (MQ=255)
                                                                                                               taagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAAt                            <  1:396803‑M2/122‑1 (MQ=255)
                                                                                                               taagttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAAt                            >  2:634789‑M2/19‑140 (MQ=255)
                                                                                                               acTATAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcca                            >  2:389847‑M1/1‑27 (MQ=255)
                                                                                                               acTACAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccag                                    >  2:474772‑M1/1‑27 (MQ=255)
                                                                                                               acTACAATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccag                                    <  1:474772‑M1/132‑106 (MQ=255)
                                                                                                                 agttggcagcatcaccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAAtgt                          <  1:192521‑M2/124‑1 (MQ=255)
                                                                                                                   taATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                        <  1:946858‑M1/140‑118 (MQ=255)
                                                                                                                   taATTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                        <  2:197417‑M1/140‑118 (MQ=255)
                                                                                                                     aTTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                      <  2:572537‑M1/140‑120 (MQ=255)
                                                                                                                     aTTGATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                      <  2:601230‑M1/140‑120 (MQ=255)
                                                                                                                        gATGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcc                   <  1:943548‑M1/140‑123 (MQ=255)
                                                                                                                         aTGGTTTTCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                  >  1:319032‑M1/1‑17 (MQ=255)
                                                                                                                             caccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGAcc              <  2:472586‑M2/136‑1 (MQ=255)
                                                                                                                              tttCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagat             <  1:621135‑M1/140‑129 (MQ=255)
                                                                                                                              tttCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagat             <  1:758439‑M1/140‑129 (MQ=255)
                                                                                                                               ttCTATGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                  >  1:535381‑M1/1‑11 (MQ=255)
                                                                                                                               ccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAg            >  1:189046‑M2/3‑140 (MQ=255)
                                                                                                                               ccCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAg            >  1:200218‑M2/3‑140 (MQ=255)
                                                                                                                                cCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGAcc              >  1:130451‑M2/2‑137 (MQ=255)
                                                                                                                                cCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGAcc              <  2:130451‑M2/136‑1 (MQ=255)
                                                                                                                                  tATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACcagcag         <  1:423288/140‑1 (MQ=255)
                                                                                                                                  tATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACcagcag         <  1:307941/140‑1 (MQ=255)
                                                                                                                                    tgtgATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCagta       >  2:886682/1‑140 (MQ=255)
                                                                                                                                       gATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttat    >  1:38098‑M1/1‑3 (MQ=255)
                                                                                                                                        aTTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGtga   >  1:542918/1‑140 (MQ=255)
                                                                                                                                        aTTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGtga   <  2:189046/140‑1 (MQ=255)
                                                                                                                                        aTTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGtga   <  2:200218/140‑1 (MQ=255)
                                                                                                                                         tttAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGtgat  <  1:795186/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                           
TTTATTACAAGTTGTCTACATGTTAATTATAATATTATACAGCGTTTTTTTTGATGTGATATTCTGGAACCATTAATTTGTAATTGGGTTGCTGTCGCCTATTTTATACATACTATAATTGATGGTTTTCTATGTGATTTAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGAT  >  NC_000913/584436‑584712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.