| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 471,472 | Δ186 bp | coding (837‑1022/1782 nt) | mdlB → | ABC transporter family protein MdlB |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 471472 | 471657 | 186 | 54 [0] | [0] 53 | mdlB | ABC transporter family protein MdlB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 471471 | 0 (0.000) | 50 (1.140) | 37/262 | 0.2 | 100% | coding (836/1782 nt) | mdlB | ABC transporter family protein MdlB |
| ? | NC_000913 | 471658 = | 0 (0.000) | coding (1023/1782 nt) | mdlB | ABC transporter family protein MdlB | |||||
GCCAGTCGTTCACACTATATGGCGAGGATGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATTGAAGTGGGCGTGCTGTATGCGTTTATCAGCTATCTTGGGCGACTTAACGAACCATTAATCGAACTGACCACGCAACAGGCGATGCTGCAACAGGCTGTTGTTGCTGGTGAGCGCGTGTTTGAACTGATG > NC_000913/471332‑471601 | gCCAGTCGTTCACACTATATGGCGAGGATGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCAT > 2:460319‑M1/1‑140 (MQ=255)gCCAGTCGTTCACACTATATGGCGAGGATGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCAT > 2:763141‑M1/1‑140 (MQ=255) cAGTCGTTCACACTATATGGCGAGGATGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcg < 2:614732‑M1/140‑3 (MQ=255) tatGGCGAGGATGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgt > 2:570266‑M1/1‑123 (MQ=255) ggCGAGGATGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcat > 2:299140‑M1/1‑120 (MQ=255) gAGGATGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttg > 2:753891‑M1/1‑117 (MQ=255) ggATGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgct > 2:747215‑M1/1‑115 (MQ=255) ggATGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgct > 1:38165‑M1/1‑115 (MQ=255) aTGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgctta > 2:20532‑M1/1‑113 (MQ=255) aTGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgctta > 1:116553‑M1/1‑113 (MQ=255) aTGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgctta > 2:458844‑M1/1‑113 (MQ=255) cAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcg < 1:753891‑M1/140‑31 (MQ=255) aCCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcga < 2:434423‑M1/140‑34 (MQ=255) aCCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcga < 2:451644‑M1/140‑34 (MQ=255) tGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgac > 2:587402‑M1/1‑103 (MQ=255) tGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgac > 1:613818‑M1/1‑103 (MQ=255) tGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgac > 1:631148‑M1/1‑103 (MQ=255) cgcCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaa > 1:368206‑M1/1‑101 (MQ=255) cgcCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaa > 2:566173‑M1/1‑101 (MQ=255) ccTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatc < 2:398162‑M1/140‑42 (MQ=255) ccTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatc < 1:650276‑M1/140‑42 (MQ=255) cGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctgg > 2:160992‑M1/1‑96 (MQ=255) gACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggt > 2:764892‑M1/1‑95 (MQ=255) gTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCCGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgcta > 2:764656‑M1/1‑91 (MQ=255) tttCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaa < 2:574453‑M1/140‑52 (MQ=255) tCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaaga < 1:20532‑M1/140‑54 (MQ=255) cGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtggtaaagaacattaa > 1:212470‑M1/1‑80 (MQ=255) cGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaa > 1:697896‑M1/1‑80 (MQ=255) cGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaa < 1:587402‑M1/140‑61 (MQ=255) cGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaa < 1:556265‑M1/140‑61 (MQ=255) gTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaat < 2:566194‑M1/140‑62 (MQ=255) tCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaat < 2:171378‑M1/139‑62 (MQ=255) tCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaat > 1:171378‑M1/1‑78 (MQ=255) gctgAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctg < 1:718249‑M1/140‑69 (MQ=255) cTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttc < 1:458844‑M1/140‑76 (MQ=255) aTCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaatt > 2:522253‑M1/1‑57 (MQ=255) gCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttg < 1:331636‑M1/140‑87 (MQ=255) gCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttg < 1:747215‑M1/140‑87 (MQ=255) aTTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggc < 1:570266‑M1/140‑91 (MQ=255) tgGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcg > 2:681212‑M1/1‑42 (MQ=255) gCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcggg < 2:368206‑M1/140‑101 (MQ=255) cTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcgggc < 2:613818‑M1/140‑102 (MQ=255) gttgATGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcgggcata > 2:524894‑M1/1‑36 (MQ=255) tGCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcgggcataccggc < 1:524894‑M1/140‑110 (MQ=255) gCTGTTTGGCTTCTCCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcgggcataccggca < 1:299140‑M1/140‑111 (MQ=255) ctcCGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcgggcataccggcagtggcaaaagca > 1:328871‑M1/1‑18 (MQ=255) ccGCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcgggcataccggcagtggcaaaagcacc < 1:237674‑M1/140‑125 (MQ=255) gCCAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcgggcataccggcagtggcaaaagcaccct < 1:460319‑M1/140‑127 (MQ=255) cAGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcgggcataccggcagtggcaaaagcaccctcg < 2:453234‑M1/140‑129 (MQ=255) aGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcgggcataccggcagtggcaaaagcaccctcgc < 1:764892‑M1/140‑130 (MQ=255) aGCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcgggcataccggcagtggcaaaagcaccctcgc < 2:116553‑M1/140‑130 (MQ=255) gCGGCACCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctggtcgggcataccggcagtggcaaaagcaccctcgcc < 2:328871‑M1/140‑131 (MQ=255) aCCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctgtcgggcataccggcagtggcaaaagcaccctcgcc > 1:694518‑M1/1‑5 (MQ=255) aCCATcgaagtcgataacgtgtcatttgcttatcgcgatgacaatctggtgctaaagaacattaatctctctgtgccttcgcgcaattttgtggcgctgtcgggcataccggcagtggcaaaagcaccctcgcc < 2:694518‑M1/134‑130 (MQ=255) | GCCAGTCGTTCACACTATATGGCGAGGATGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATTGAAGTGGGCGTGCTGTATGCGTTTATCAGCTATCTTGGGCGACTTAACGAACCATTAATCGAACTGACCACGCAACAGGCGATGCTGCAACAGGCTGTTGTTGCTGGTGAGCGCGTGTTTGAACTGATG > NC_000913/471332‑471601 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |