| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 471,472 | Δ186 bp | coding (837‑1022/1782 nt) | mdlB → | ABC transporter family protein MdlB |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 471472 | 471657 | 186 | 54 [0] | [0] 53 | mdlB | ABC transporter family protein MdlB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 471471 | 0 (0.000) | 50 (1.140) | 37/262 | 0.2 | 100% | coding (836/1782 nt) | mdlB | ABC transporter family protein MdlB |
| ? | NC_000913 | 471658 = | 0 (0.000) | coding (1023/1782 nt) | mdlB | ABC transporter family protein MdlB | |||||
CGAACCATTAATCGAACTGACCACGCAACAGGCGATGCTGCAACAGGCTGTTGTTGCTGGTGAGCGCGTGTTTGAACTGATGGACGGACCGCGCCAGCAATATGGCAATGATGATCGCCCGTTACAGAGTGGCACCATCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCAGTGGCAAAAGCACCCTCGCCAGTTTATTGA > NC_000913/471520‑471797 | cagtcgttcacactatatggcgaggatgcaaaccctgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCg < 2:614732‑M2/2‑1 (MQ=255) tatggcgaggatgcaaaccctgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACgtgt > 2:570266‑M2/124‑140 (MQ=255) ggcgaggatgcaaaccctgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCAt > 2:299140‑M2/121‑140 (MQ=255) gaggatgcaaaccctgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTg > 2:753891‑M2/118‑140 (MQ=255) ggatgcaaaccctgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCt > 2:747215‑M2/116‑140 (MQ=255) ggatgcaaaccctgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCt > 1:38165‑M2/116‑140 (MQ=255) atgcaaaccctgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTa > 1:116553‑M2/114‑140 (MQ=255) atgcaaaccctgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTa > 2:20532‑M2/114‑140 (MQ=255) atgcaaaccctgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTa > 2:458844‑M2/114‑140 (MQ=255) caaaccctgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATcg < 1:753891‑M2/30‑1 (MQ=255) accctgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGa < 2:451644‑M2/33‑1 (MQ=255) accctgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGa < 2:434423‑M2/33‑1 (MQ=255) tgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGAc > 2:587402‑M2/104‑140 (MQ=255) tgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGAc > 1:613818‑M2/104‑140 (MQ=255) tgcgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGAc > 1:631148‑M2/104‑140 (MQ=255) cgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACaa > 1:368206‑M2/102‑140 (MQ=255) cgcctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACaa > 2:566173‑M2/102‑140 (MQ=255) cctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATc < 2:398162‑M2/41‑1 (MQ=255) cctcgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATc < 1:650276‑M2/41‑1 (MQ=255) cgacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTgg > 2:160992‑M2/97‑140 (MQ=255) gacggttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGt > 2:764892‑M2/96‑140 (MQ=255) gttttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagccgcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTa > 2:764656‑M2/92‑140 (MQ=255) tttctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTaaa < 2:574453‑M2/51‑1 (MQ=255) tctgctgcgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGa < 1:20532‑M2/53‑1 (MQ=255) cgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGGTAAAGAACATTaa > 1:212470‑M2/81‑140 (MQ=255) cgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTaa > 1:697896‑M2/81‑140 (MQ=255) cgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTaa < 1:587402‑M2/60‑1 (MQ=255) cgtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTaa < 1:556265‑M2/60‑1 (MQ=255) gtccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAAt < 2:566194‑M2/61‑1 (MQ=255) tccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAAt > 1:171378‑M2/79‑139 (MQ=255) tccgctgctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAAt < 2:171378‑M2/61‑1 (MQ=255) gctgagtctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCtg < 1:718249‑M2/68‑1 (MQ=255) ctgttttcatcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTc < 1:458844‑M2/75‑1 (MQ=255) atcgctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAAtt > 2:522253‑M2/58‑140 (MQ=255) gctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTtg < 1:747215‑M2/86‑1 (MQ=255) gctcattctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTtg < 1:331636‑M2/86‑1 (MQ=255) attctttgtggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGgc < 1:570266‑M2/90‑1 (MQ=255) tggcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCg > 2:681212‑M2/43‑140 (MQ=255) gcttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCggg < 2:368206‑M2/100‑1 (MQ=255) cttgttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGc < 2:613818‑M2/101‑1 (MQ=255) gttgatgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATa > 2:524894‑M2/37‑140 (MQ=255) tgctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGc < 1:524894‑M2/109‑1 (MQ=255) gctgtttggcttctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCa < 1:299140‑M2/110‑1 (MQ=255) ctccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCAGTGGCAAAAGCa > 1:328871‑M2/19‑140 (MQ=255) ccgccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCAGTGGCAAAAGCAcc < 1:237674‑M2/124‑1 (MQ=255) gccagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCAGTGGCAAAAGCACCCt < 1:460319‑M2/126‑1 (MQ=255) cagcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCAGTGGCAAAAGCACCCTCg < 2:453234‑M2/128‑1 (MQ=255) agcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCAGTGGCAAAAGCACCCTCGc < 2:116553‑M2/129‑1 (MQ=255) agcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCAGTGGCAAAAGCACCCTCGc < 1:764892‑M2/129‑1 (MQ=255) gcggcaccatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCAGTGGCAAAAGCACCCTCGcc < 2:328871‑M2/130‑1 (MQ=255) accatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCT‑GTCGGGCATACCGGCAGTGGCAAAAGCACCCTCGcc < 2:694518‑M2/129‑1 (MQ=255) accatCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCT‑GTCGGGCATACCGGCAGTGGCAAAAGCACCCTCGcc > 1:694518‑M2/6‑134 (MQ=255) cGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCAGTGGCAAAAGCACCCTCGCCAGTTTATTGa > 2:226115/1‑140 (MQ=255) | CGAACCATTAATCGAACTGACCACGCAACAGGCGATGCTGCAACAGGCTGTTGTTGCTGGTGAGCGCGTGTTTGAACTGATGGACGGACCGCGCCAGCAATATGGCAATGATGATCGCCCGTTACAGAGTGGCACCATCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCAGTGGCAAAAGCACCCTCGCCAGTTTATTGA > NC_000913/471520‑471797 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |