| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 781143 | 33 (1.010) | 15 (0.510) +TAAACACTTTTTAAC |
8/246 | 1.7 | 41.7% | noncoding (76/76 nt) | valZ | tRNA‑Val |
| ? | NC_000913 | 2947605 = | 14 (0.430) | intergenic (+32/‑2) | metW/metV | tRNA‑Met/tRNA‑Met | |||||
GTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/781070‑781143‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAT > NC_000913/2947605‑2947688 ||||||||||||||| agGATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGcc > 1:578917/3‑138agGATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGcc > 1:692863/3‑138 TAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAAACCGAAGGCCGcagg > 2:1038300/1‑136 CAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAA > 2:733150/1‑140 GCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAAT > 1:368555/1‑140 GCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAAT > 1:677981/1‑140 GCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAAT > 1:931234/1‑140 GCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAAT > 2:377028/1‑140 GCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAAT > 2:812266/1‑140 CTGGTAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGGTCAAATC > 1:606819/1‑140 GCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCCCC < 1:733150/140‑1 atctgCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCCCCGC < 2:1013913/135‑1 tctgCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCCCCGCA < 1:226108/136‑1 ACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCCCCGCAACCAAatt > 2:913960/1‑137 CAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCCCCGCAACCAAatta < 2:677981/140‑5 ||||||||||||||| GTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/781070‑781143‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAT > NC_000913/2947605‑2947688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |