| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,037,218 | 42 bp→TTATCAACACATGAGTGTTGATCCCAATAC | intergenic (+1/‑1) | ileT → / → alaT | tRNA‑Ile/tRNA‑Ala |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4037217 | 2 (0.060) | 20 (0.780) +TTATCAACACATGAGTGTTGATCCCAATAC |
10/216 | 1.1 | 96.2% | noncoding (77/77 nt) | ileT | tRNA‑Ile |
| ? | NC_000913 | 4037260 = | 0 (0.000) | noncoding (1/76 nt) | alaT | tRNA‑Ala | |||||
GCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4037143‑4037217‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCT > NC_000913/4037260‑4037338 |||||||||||||||||||||||||||||| gccttTAGCTCAGCTGGTTAGAGCACACCCCTGATAAGGGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTG < 2:202297/135‑1 ttTAGCTCAGCTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAa > 1:1192624/3‑139 tTAGCTCAGCTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAag > 1:1001111/2‑138 GAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTT < 1:193817/140‑1 CGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGA < 1:241233/140‑1 GCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGAT < 2:240913/140‑1 ACCCCTGATAAGGGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCC > 2:1179866/1‑140 ACCCCTGATAAGGGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCC > 1:619772/1‑140 CCTGATAAGGGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCCCGC < 2:414813/140‑1 CTGATAAGGGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCCCGCt < 2:834224/140‑2 TAAGGGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCCCGCttggc < 2:1001111/140‑6 GGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCA > 2:553503/1‑140 GGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCA > 2:626168/1‑140 GGTGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCA > 2:777186/1‑140 TGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCAtt > 1:998237/1‑138 TGAGGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCAtt > 1:1195724/1‑138 GGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCAtttgt > 1:797699/1‑135 GGTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCAtttgt > 2:984878/1‑135 GTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCAtttgtt < 1:566582/140‑7 GTCGGTGGTTCGAGTCCACTAAGGCCCACCATTATCAACACATGAGTGTTGATCCCAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCAtttgtt > 2:566582/1‑134 |||||||||||||||||||||||||||||| GCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4037143‑4037217‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCT > NC_000913/4037260‑4037338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |