| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4180665 = | 150 (1.150) | 5 (0.040) | 5/256 | 7.6 | 3.4% | coding (106/366 nt) | rplL | 50S ribosomal subunit protein L12 |
| ? | NC_000913 | = 4180661 | 144 (1.190) | coding (102/366 nt) | rplL | 50S ribosomal subunit protein L12 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTAGCTTCTTTCAGACCCAGGCCAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4180813‑4180665‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagcagcGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAACTGCTTCAATGATTTGATCTTTAGTGATAGACATTTAAATTGTTCCTGAATATCAGAATAAGTTTATACGT < NC_000913/4180661‑4180523 TTAGCTTCTTTCAGACCCAGGCCAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTAC > 2:280721/1‑140TTAGCTTCTTTCAGACCCAGGCCAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTAC > 2:1293529/1‑140TTAGCTTCTTTCAGACCCAGGCCAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTAC > 2:1116642/1‑140 TTCTTTCAGACCCAGGCCAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAG < 2:1444358/140‑1 TTCTTTCAGACCCAGGCCAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAG < 2:1349362/140‑1 TCTTTCAGACCCAGGCCAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAGC > 2:296951/1‑140 CTTTCAGACCCAGGCCAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAGCA > 1:459798/1‑140 TTCAGACCCAGGCCAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAGCAGC < 1:1035691/140‑1 GGCCAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAGCA < 1:1109066/128‑1 GGCCAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAGCA > 2:1109066/1‑128 CAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAGCAGCGGAAACACCGAAT < 2:1596309/140‑1 TGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAGCAGCGGAAACACCGAATTTTT > 1:1452291/1‑140 TCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAGCAGCGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCA > 2:502236/1‑140 CAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAGCAGCGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAA < 2:1452291/140‑1 GAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAGCAGCGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAACT < 1:502236/140‑1 AGCAGCAGCGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAACTGCTTCAATGATTTGATCTTTAGTGATAGACATTTAAATTGTTCCTGAATATCAGAATAAGT > 1:1927418/1‑140 GCAGCAGCGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAACTGCTTCAATGATTTGATCTTTAGTGATAGACATTTAAATTGTTCCTGAATATCAGAATAAGTT > 1:44049/1‑140 AGCAGCGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAACTGCTTCAATGATTTGATCTTTAGTGATAGACATTTAAATTGTTCCTGAATATCAGAATAAGTTTA > 1:1797822/1‑140 AGCAGCGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAACTGCTTCAATGATTTGATCTTTAGTGATAGACATTTAAATTGTTCCTGAATATCAGAATA > 1:934053/1‑134 AGCAGCGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAACTGCTTCAATGATTTGATCTTTAGTGATAGACATTTAAATTGTTCCTGAATATCAGAATA < 2:934053/134‑1 CAGCGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAACTGCTTCAATGATTTGATCTTTAGTGATAGACATTTAAATTGTTCCTGAATATCAGAATAAGTTTATA < 1:1536579/140‑1 GCGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAACTGCTTCAATGATTTGATCTTTAGTGATAGACATTTAAATTGTTCCTGAATATCAGAAT < 1:526671/129‑1 GCGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAACTGCTTCAATGATTTGATCTTTAGTGATAGACATTTAAATTGTTCCTGAATATCAGAAT > 2:526671/1‑129 CGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAACTGCTTCAATGATTTGATCTTTAGTGATAGACATTTAAATTGTTCCTGAATATCAGAATAAGTTTATACGT > 2:123381/1‑140 TTAGCTTCTTTCAGACCCAGGCCAGTTGCGCCACGTACTGCTTTGATAACAGCAACTTTGTTAGCGCCAGCAGCTTTCAGAATTACGTCGAATTCAGTTTTTTCTTCAGCAGCTTCAACCGGGCCAGCAGCTACAGCTACAGCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4180813‑4180665‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagcagcGGAAACACCGAATTTTTCTTCCATTGCAGAGATCAGTTCTACAACGTCCATTACAGACATAGCTGCAACTGCTTCAATGATTTGATCTTTAGTGATAGACATTTAAATTGTTCCTGAATATCAGAATAAGTTTATACGT < NC_000913/4180661‑4180523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |