Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,587,854	Δ12 bp	coding (432‑443/504 nt)	ydeR ←	putative fimbrial protein YdeR

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1587854	1587865	12	96 [0]	[0] 96	ydeR	putative fimbrial protein YdeR

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1587853	0 (0.000)	96 (1.000)	53/274	0.4	100%	coding (444/504 nt)	ydeR	putative fimbrial protein YdeR
	?	NC_000913	1587866 =	0 (0.000)					coding (431/504 nt)	ydeR	putative fimbrial protein YdeR

CTGATTGTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCATTCACCGTGATAGCTCTTGCCTTAAGTGGAAACTGTGCATTACGAGTGATCTCATCAACAATAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGT  >  NC_000913/1587718‑1587990                                                                                                                                        |                                                                                                                                          cTGATTGTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctc                                                                                                                                       >  1:2212627‑M1/1‑136 (MQ=255)  tGATTGTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctct                                                                                                                                      >  2:1122140‑M1/1‑135 (MQ=255)   gATTGTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctctt                                                                                                                                     >  1:1201412‑M1/1‑134 (MQ=255)    aTTGTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttg                                                                                                                                    >  1:1650485‑M1/1‑133 (MQ=255)    aTTGTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttg                                                                                                                                    >  2:2292124‑M1/1‑133 (MQ=255)    aTTGTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttg                                                                                                                                    >  1:1490755‑M1/1‑133 (MQ=255)    aTTGTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttg                                                                                                                                    >  2:1898224‑M1/1‑133 (MQ=255)     ttGTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgc                                                                                                                                   >  2:1385651‑M1/1‑132 (MQ=255)      tGTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgcc                                                                                                                                  >  2:1647653‑M1/1‑131 (MQ=255)      tGTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgcc                                                                                                                                  >  2:1028072‑M1/1‑131 (MQ=255)       gTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgcct                                                                                                                                 <  1:2396989‑M1/140‑11 (MQ=255)       gTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgcct                                                                                                                                 <  2:2548682‑M1/140‑11 (MQ=255)       gTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgcct                                                                                                                                 <  2:2357913‑M1/140‑11 (MQ=255)       gTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCATGCGTTTCCAgctcttgcct                                                                                                                                 <  1:2460643‑M1/140‑11 (MQ=255)            aCCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagt                                                                                                                            <  1:1628080‑M1/140‑16 (MQ=255)              ccATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgcct                                                                                                                                 >  2:1979538‑M1/1‑123 (MQ=255)              ccATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgcct                                                                                                                                 <  1:1979538‑M1/133‑11 (MQ=255)                 tGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaa                                                                                                                       <  1:1589392‑M1/140‑21 (MQ=255)                  gATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaac                                                                                                                      >  2:1707962‑M1/1‑119 (MQ=255)                  gATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaac                                                                                                                      <  2:1512826‑M1/140‑22 (MQ=255)                  gATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaac                                                                                                                      >  1:1928697‑M1/1‑119 (MQ=255)                    tatatCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactg                                                                                                                    <  2:1603848‑M1/140‑24 (MQ=255)                    tatatCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactg                                                                                                                    <  1:1920646‑M1/140‑24 (MQ=255)                    tatatCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactg                                                                                                                    <  1:1037885‑M1/140‑24 (MQ=255)                       atCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgc                                                                                                                 >  2:2125934‑M1/1‑114 (MQ=255)                        tCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgca                                                                                                                >  2:1408894‑M1/1‑113 (MQ=255)                         ccTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCGGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcat                                                                                                               <  1:1919251‑M1/140‑29 (MQ=255)                            aaGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattac                                                                                                            >  1:1403753‑M1/1‑109 (MQ=255)                            aaGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattac                                                                                                            >  1:1076352‑M1/1‑109 (MQ=255)                            aaGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattac                                                                                                            >  1:2318718‑M1/1‑109 (MQ=255)                            aaGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattac                                                                                                            >  1:1539185‑M1/1‑109 (MQ=255)                            aaGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattac                                                                                                            >  2:2504988‑M1/1‑109 (MQ=255)                             aGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacg                                                                                                           >  1:2049164‑M1/1‑108 (MQ=255)                             aGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacg                                                                                                           >  1:1609953‑M1/1‑108 (MQ=255)                             aGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacg                                                                                                           >  1:2194876‑M1/1‑108 (MQ=255)                             aGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacg                                                                                                           >  1:2233617‑M1/1‑108 (MQ=255)                             aGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacg                                                                                                           >  1:1277489‑M1/1‑108 (MQ=255)                             aGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacg                                                                                                           >  1:2392167‑M1/1‑108 (MQ=255)                             aGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgagcattacg                                                                                                           >  2:2562526‑M1/1‑108 (MQ=255)                              ggTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacga                                                                                                          >  1:2025302‑M1/1‑107 (MQ=255)                               gTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgag                                                                                                         <  1:1098066‑M1/140‑35 (MQ=255)                                 tAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtg                                                                                                       <  1:2479242‑M1/140‑37 (MQ=255)                                  aaaaaTTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtga                                                                                                      >  1:1500169‑M1/1‑103 (MQ=255)                                  aaaaaTTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtga                                                                                                      >  1:1712653‑M1/1‑103 (MQ=255)                                  aaaaaTTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtga                                                                                                      >  1:1351775‑M1/1‑103 (MQ=255)                                  aaaaaTTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtga                                                                                                      >  1:1428879‑M1/1‑103 (MQ=255)                                   aaaaTTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgat                                                                                                     <  2:1556320‑M1/140‑39 (MQ=255)                                   aaaaTTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgat                                                                                                     <  1:1122140‑M1/140‑39 (MQ=255)                                   aaaaTTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgat                                                                                                     >  1:1433045‑M1/1‑102 (MQ=255)                                   aaaaTTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgat                                                                                                     >  1:1491363‑M1/1‑102 (MQ=255)                                         gATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatc                                                                                               >  2:1330193‑M1/1‑96 (MQ=255)                                               aaaaGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaat                                                                                         <  2:1401786‑M1/140‑51 (MQ=255)                                                    aagGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccg                                                                                    >  2:1289721‑M1/1‑85 (MQ=255)                                                                atcgaatcgaCGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgc                                                                        <  1:2302454‑M1/140‑68 (MQ=255)                                                                  cgaatcgaCGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgcca                                                                      <  2:2049164‑M1/140‑70 (MQ=255)                                                                         aCGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccatttttta                                                               <  2:1490755‑M1/140‑77 (MQ=255)                                                                            ttATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacg                                                            <  2:1428879‑M1/140‑80 (MQ=255)                                                                            ttATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacg                                                            <  1:1028072‑M1/140‑80 (MQ=255)                                                                            ttATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacg                                                            <  2:2586530‑M1/140‑80 (MQ=255)                                                                              aTTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgca                                                          <  2:2025302‑M1/140‑82 (MQ=255)                                                                              aTTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgca                                                          <  2:1971084‑M1/140‑82 (MQ=255)                                                                              aTTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgca                                                          <  2:2194876‑M1/140‑82 (MQ=255)                                                                                     ggTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcct                                                   <  1:1330193‑M1/140‑89 (MQ=255)                                                                                        gtAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggt                                                <  1:1707962‑M1/140‑92 (MQ=255)                                                                                        gtAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggt                                                <  1:2504988‑M1/140‑92 (MQ=255)                                                                                        gtAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggt                                                <  2:1609953‑M1/140‑92 (MQ=255)                                                                                          aGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtca                                              <  2:1749821‑M1/140‑94 (MQ=255)                                                                                                caTTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatccttgtcatccctc                                        >  1:1715150‑M1/1‑41 (MQ=255)                                                                                                caTTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctc                                        >  1:1590496‑M1/1‑41 (MQ=255)                                                                                                caTTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctc                                        >  2:1837495‑M1/1‑41 (MQ=255)                                                                                                 aTTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctca                                       >  2:2575970‑M1/1‑40 (MQ=255)                                                                                                 aTTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctca                                       >  1:1926771‑M1/1‑40 (MQ=255)                                                                                                 aTTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctca                                       >  1:1823117‑M1/1‑40 (MQ=255)                                                                                                 aTTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctca                                       >  1:2486635‑M1/1‑40 (MQ=255)                                                                                                 aTTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctca                                       >  2:1345896‑M1/1‑40 (MQ=255)                                                                                                  ttGATTAGCGTCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcag                                      <  1:2292124‑M1/140‑102 (MQ=255)                                                                                                  ttGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcag                                      <  2:2318718‑M1/140‑102 (MQ=255)                                                                                                    gATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagct                                    <  2:1403753‑M1/140‑104 (MQ=255)                                                                                                     aTTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctc                                   >  1:2423429‑M1/1‑36 (MQ=255)                                                                                                          cgcCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatct                              >  1:2185326‑M1/1‑31 (MQ=255)                                                                                                           gcCTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctg                             >  1:2302048‑M1/1‑30 (MQ=255)                                                                                                            ccTCGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctga                            <  2:1928697‑M1/140‑112 (MQ=255)                                                                                                               cGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaata                         >  1:1326580‑M1/1‑26 (MQ=255)                                                                                                               cGATCGTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaata                         >  2:1375311‑M1/1‑26 (MQ=255)                                                                                                                    gTTCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaatattttc                    >  2:2031276‑M1/1‑21 (MQ=255)                                                                                                                     ttCCCTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgccatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaatattttcg                   >  2:2574163‑M1/1‑20 (MQ=255)                                                                                                                        ccTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaatattttcggca                <  2:1351775‑M1/140‑124 (MQ=255)                                                                                                                        ccTGGCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatcacatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaatattttcggca                <  2:1433045‑M1/140‑124 (MQ=255)                                                                                                                            gCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaatattttcggcagtac            <  2:1491363‑M1/140‑128 (MQ=255)                                                                                                                            gCTTGCGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaatattttcggcagtac            >  2:1128357‑M1/1‑13 (MQ=255)                                                                                                                            gCTTGCGTTTCCAgctcttgccttaagtggaaactgagcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaatattttcggcagtac            <  1:2562526‑M1/140‑128 (MQ=255)                                                                                                                                 cGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaatattttcggcagtaccttca       <  1:1647653‑M1/140‑133 (MQ=255)                                                                                                                                 cGTTTCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaatattttcggcagtaccttca       >  2:1152692‑M1/1‑8 (MQ=255)                                                                                                                                    ttCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaatattttcggcagtaccttcattt    <  2:1076352‑M1/140‑136 (MQ=255)                                                                                                                                    ttCCAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaatattttcggcagtaccttcattt    <  2:2486635‑M1/140‑136 (MQ=255)                                                                                                                                      ccAgctcttgccttaagtggaaactgtgcattacgagtgatctcatcaacaataaccgttttgctatcgccattttttaacgcagcatcctggtcatccctcagctctatctgaatattttcggcagtaccttcattttt  >  1:2046860‑M1/1‑3 (MQ=255)                                                                                                                                        |                                                                                                                                          CTGATTGTTTTACCCATGATATATCCTAAGGTTAAAAATTGATTTAAAAAGAAGGCTAAGAAAATCGAATCGACGTTATTGCCAGGTGTAGATCACATTGATTAGCGCCTCGATCGTTCCCTGGCTTGCGTTTCCATTCACCGTGATAGCTCTTGCCTTAAGTGGAAACTGTGCATTACGAGTGATCTCATCAACAATAACCGTTTTGCTATCGCCATTTTTTAACGCAGCATCCTGGTCATCCCTCAGCTCTATCTGAATATTTTCGGCAGT  >  NC_000913/1587718‑1587990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑