New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 462691	71 (0.930)	3 (0.040)	3/258	7.7	4.8%	coding (777/1872 nt)	ppiD	periplasmic folding chaperone
	?	NC_000913	= 462899	52 (0.730)					coding (985/1872 nt)	ppiD	periplasmic folding chaperone
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAACAGGAGATTGCCAGCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGACCAGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/462545‑462691 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccagcatTTTTCAGTTCGTCCGGGATAGTGGCATCTTCTAACCAACCCATATCGCCGCCGTTACGAGCAGAGATAATATCGGCAGATTTTTCTTTGGCTAATGCAGCAAAATCACCGCCTTTATTCAGCTCATCAAGTA  <  NC_000913/462899‑462768                                                                                                                                                                                                                                                                                         GAACAGGAGATTGCCAGCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGA                                                                                                                                             <  1:704216/140‑1  AACAGGAGATTGCCAGCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGAC                                                                                                                                            <  1:970492/140‑1  AACAGGAGATTGCCAGCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGAC                                                                                                                                            <  2:1156154/140‑1  AACAGGAGATTGCCAGCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGAC                                                                                                                                            <  2:487907/140‑1  AACAGGAGATTGCCAGCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGAC                                                                                                                                            <  2:658331/140‑1   ACAGGAGATTGCCAGCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGACC                                                                                                                                           <  1:978781/140‑1   ACAGGAGATTGCCAGCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGACC                                                                                                                                           <  1:998534/140‑1   ACAGGAGATTGCCAGCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGACC                                                                                                                                           <  2:261933/140‑1                 GCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGACC                                                                                                                                           >  1:1105240/1‑126                 GCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGACC                                                                                                                                           <  2:1105240/126‑1                                    AAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑AGCATTTTTCAGTTCGTCCGGGATAGTGGCATCTTCTAACCAACCC                                                                                             >  2:658371/1‑140                                                 ACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGACCAGCATTTTTCAGTTCGTCCGGGATAGTGGCATCTTCTAACCAACCC                                                                                             >  1:920484/1‑140                                                                                  CTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGACCAGCATTTTTCAGTTCGTCCGGGATAGTGGCATCTTCTAACCAACCCATATCGCCGCCGTTACGAGCAGAGATAATATCG                                                            <  2:920484/140‑1                                                                                                                                           GACCAGCATTTTTCAGTTCGTCCGGGATAGTGGCATCTTCTAACCACCCCATACCGCCGCCGTTACGAGCAGAGATAATATCGGCAGATTTTTCTTTGGCTAATGCAGCAAAATCACCGCCTTTATTCAGCTCATCAAGT   <  2:1282191/140‑1                                                                                                                                           GACCAGCATTTTTCAGTTCGTCCGGGATAGTGGCATCTTCTAACCAACCCATATCGCCGCCGTTACGAGCAGAGATAATATCGGCAGATTTTTCTTTGGCTAATGCAGCAAAATCACCGCCTTTATTCAGCTCATCAAGT   <  1:1276146/140‑1                                                                                                                                            ACCAGCATTTTTCAGTTCGTCCGGGATAGTGGCATCTTCTAACCAACCCATATCGCCGCCGTTACGAGCAGAGATAATATCGGCAGATTTTTCTTTGGCTAATGCAGCAAAATCACCGCCTTTATTCAGCTCATCAAGTA  >  2:1000132/1‑140                                                                                                                                                                                                                                                                                         GAACAGGAGATTGCCAGCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGACCAGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/462545‑462691 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccagcatTTTTCAGTTCGTCCGGGATAGTGGCATCTTCTAACCAACCCATATCGCCGCCGTTACGAGCAGAGATAATATCGGCAGATTTTTCTTTGGCTAATGCAGCAAAATCACCGCCTTTATTCAGCTCATCAAGTA  <  NC_000913/462899‑462768

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.