BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1969039 =	43 (0.560)	81 (1.090)	53/268	0.2	67.6%	coding (326/861 nt)	cheR	chemotaxis protein methyltransferase
*	?	NC_000913	= 1969105	36 (0.480)	81 (1.090)	53/268	0.2	67.6%	coding (260/861 nt)	cheR	chemotaxis protein methyltransferase

Only 100 of 170 total aligned reads displayed.

GATATCACTGGCAAACACTTTCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGATTAGATTCCAGCAAGTTCAGATAATGACCGAAATCCGTCAG  >  NC_000913/1968900‑1969178

gATATCACTGGCAAACACTTTCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGAcgtgcgt                                                                                                                                             <  1:273567/140‑1 (MQ=255)

      tacggctcttcgccggtcgaagccgccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCcg                                                                                                                                       <  2:564640‑M1/7‑1 (MQ=255)

      aCTGGCAAACACTTTCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCcg                                                                                                                                       <  1:1271235/140‑1 (MQ=255)

       cTGGCAAACACTTTCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCcgc                                                                                                                                      <  1:427791/140‑1 (MQ=255)

       acggctcttcgccggtcgaagccgccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCcgc                                                                                                                                      >  2:96689‑M1/133‑140 (MQ=255)

         ggCAAACACTTTCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGa                                                                                                                                    >  1:947206/1‑140 (MQ=255)

          gctcttcgccggtcgaagccgccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAg                                                                                                                                   >  2:834320‑M1/130‑140 (MQ=255)

          gctcttcgccggtcgaagccgccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAg                                                                                                                                   >  2:813692‑M1/130‑140 (MQ=255)

          gctcttcgccggtcgaagccgccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAg                                                                                                                                   >  1:444279‑M1/130‑140 (MQ=255)

          gCAAACACTTTCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAg                                                                                                                                   <  2:1023217/140‑1 (MQ=255)

          gCAAACACTTTCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAg                                                                                                                                   >  2:444279/1‑140 (MQ=255)

           ctcttcgccggtcgaagccgccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGc                                                                                                                                  <  2:384466‑M1/12‑1 (MQ=255)

           ctcttcgccggtcgaagccgccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGc                                                                                                                                  >  2:526465‑M1/129‑140 (MQ=255)

           cAAACACTTTCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGc                                                                                                                                  <  1:261333/140‑1 (MQ=255)

            tcttcgccggtcgaagccgccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCa                                                                                                                                 >  1:1167262‑M1/128‑140 (MQ=255)

            tcttcgccggtcgaagccgccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCa                                                                                                                                 >  2:809026‑M1/128‑140 (MQ=255)

            aaaCACTTTCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCa                                                                                                                                 >  1:142262/1‑140 (MQ=255)

             cttcgccggtcgaagccgccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCcg                                                                                                                                       >  1:134015‑M1/127‑133 (MQ=255)

             cttcgccggtcgaagccgccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCcg                                                                                                                                       <  2:134015‑M1/7‑1 (MQ=255)

              acacTTTCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCaga                                                                                                                               <  2:1123688/140‑1 (MQ=255)

                 cTTTCCAGCGTCCGGGTGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAggg                                                                                                                            <  2:715981/140‑1 (MQ=255)

                  ccggtcgaagccgccgcgctccatacgcgagactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGa                                                                                                                           >  2:883772‑M1/122‑140 (MQ=255)

                   ttCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGaa                                                                                                                          <  2:623867/140‑1 (MQ=255)

                    tCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGaaa                                                                                                                         >  2:530425/1‑140 (MQ=255)

                    tCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGaaa                                                                                                                         >  1:809026/1‑140 (MQ=255)

                    tCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGaaa                                                                                                                         >  1:866806/1‑140 (MQ=255)

                     gtcgaagccgccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAat                                                                                                                        <  1:578741‑M1/22‑1 (MQ=255)

                        gCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAatgat                                                                                                                     <  2:116919/140‑1 (MQ=255)

                         cGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAatgatg                                                                                                                    >  2:291191/1‑140 (MQ=255)

                          gTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGAtgt                                                                                                                   >  1:526465/1‑140 (MQ=255)

                          gTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGAtgt                                                                                                                   >  1:834320/1‑140 (MQ=255)

                           tCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGAtgtg                                                                                                                  >  2:1114491/1‑140 (MQ=255)

                              gggCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGACGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCt                                                                                                               <  2:778611/140‑1 (MQ=255)

                              gccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCt                                                                                                               >  2:212666‑M1/110‑140 (MQ=255)

                              gccgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCt                                                                                                               >  2:190969‑M1/110‑140 (MQ=255)

                                gcgcGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCa                                                                                                             <  1:279948/140‑1 (MQ=255)

                                cgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCa                                                                                                             <  1:488022‑M1/33‑1 (MQ=255)

                                cgcgctccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCa                                                                                                             <  1:261732‑M1/33‑1 (MQ=255)

                                    ggTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGa                                                                                                         <  1:1259424/140‑1 (MQ=255)

                                      ccatacgcgatactcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGaaa                                                                                                       <  1:640099‑M1/39‑1 (MQ=255)

                                          cAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATg                                                                                                   <  1:527280/140‑1 (MQ=255)

                                                   tcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCTTCACGGAAAAATGCCGTCAGAt                                                                                          <  2:1026128‑M1/52‑1 (MQ=255)

                                                   tcgccagaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGAt                                                                                          <  2:775517‑M1/52‑1 (MQ=255)

                                                     ccagcGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTc                                                                                        >  2:305720/1‑140 (MQ=255)

                                                         gaacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTgg                                                                                    >  1:1056408‑M1/83‑140 (MQ=255)

                                                         cGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGG‑AAAATGCCGTCAGATTCGTGGt                                                                                   >  2:237695/1‑140 (MQ=255)

                                                          gTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGt                                                                                   <  1:722296/140‑1 (MQ=255)

                                                          aacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCTAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGt                                                                                   >  1:2501‑M1/82‑140 (MQ=255)

                                                          aacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGt                                                                                   >  1:72948‑M1/82‑140 (MQ=255)

                                                          aacggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGt                                                                                   <  2:1215991‑M1/59‑1 (MQ=255)

                                                            cATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCa                                                                                 <  1:186588/140‑1 (MQ=255)

                                                             ggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAg                                                                                <  1:1194425‑M1/62‑1 (MQ=255)

                                                             ggcgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAg                                                                                >  2:640099‑M1/79‑140 (MQ=255)

                                                              tCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGc                                                                               <  1:1110875/140‑1 (MQ=255)

                                                               cgacgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCg                                                                              <  2:957873‑M1/64‑1 (MQ=255)

                                                                 acgtgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGaa                                                                            >  1:623765‑M1/75‑140 (MQ=255)

                                                                    tgcgtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTg                                                                         <  1:1291204‑M1/69‑1 (MQ=255)

                                                                         tACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccg                                                                    <  2:564640‑M2/140‑8 (MQ=255)

                                                                             gCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgag                                                                >  1:305720‑M2/1‑129 (MQ=255)

                                                                             gCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgag                                                                >  2:834320‑M2/1‑129 (MQ=255)

                                                                              ctctTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagc                                                               <  1:190969‑M2/140‑13 (MQ=255)

                                                                              ctctTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagc                                                               <  2:623765‑M2/140‑13 (MQ=255)

                                                                              ctctTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagc                                                               >  1:564640‑M2/1‑128 (MQ=255)

                                                                               tctTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagca                                                              >  1:530425‑M2/1‑127 (MQ=255)

                                                                               tctTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagca                                                              >  1:610760‑M2/1‑127 (MQ=255)

                                                                                 ttCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcaga                                                            >  1:191907‑M2/1‑125 (MQ=255)

                                                                                   cGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagg                                                          <  1:1256422‑M2/140‑18 (MQ=255)

                                                                                    agagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACt                                                         >  2:521394‑M1/56‑140 (MQ=255)

                                                                                     ccGGTCGAAGCCGCCGCGCTCCATACGCGAGACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagaggga                                                        >  2:883772‑M2/1‑121 (MQ=255)

                                                                                         gaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCg                                                    >  2:866806‑M1/51‑140 (MQ=255)

                                                                                         gaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCg                                                    >  2:1291204‑M1/51‑140 (MQ=255)

                                                                                         gaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCg                                                    >  1:291191‑M1/51‑140 (MQ=255)

                                                                                         gaaatgacgtgcctcacggaaaaatgccgtcagattcgtggccacggaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCg                                                    >  2:261732‑M1/51‑140 (MQ=255)

                                                                                           aatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCt                                                  >  1:1215991‑M1/49‑140 (MQ=255)

                                                                                           aatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCt                                                  >  2:599044‑M1/49‑140 (MQ=255)

                                                                                            atgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCtg                                                 <  1:1028012‑M1/93‑1 (MQ=255)

                                                                                                 gccgcGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcct                                            >  2:190969‑M2/1‑109 (MQ=255)

                                                                                                 gccgcGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcct                                            >  2:1256422‑M2/1‑109 (MQ=255)

                                                                                                  tgcctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGa                                           <  1:58974‑M1/99‑1 (MQ=255)

                                                                                                    cctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGAtt                                         <  2:241508‑M1/101‑1 (MQ=255)

                                                                                                    cctcacggaaaaatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGAtt                                         <  2:1249397‑M1/101‑1 (MQ=255)

                                                                                                               gcgATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcctcacggaaacatgcc                              <  2:57792‑M2/140‑46 (MQ=255)

                                                                                                               gcgATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgcc                              <  1:599044‑M2/140‑46 (MQ=255)

                                                                                                               aatgccgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGATTAGATTCCAGCa                              >  1:1129123‑M1/29‑140 (MQ=255)

                                                                                                                    cgtcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGATTAGATTCCAGCAAGTTc                         >  2:1028012‑M1/24‑140 (MQ=255)

                                                                                                                      tcagattcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGATTAGATTCCAGCAAGTTCAg                       <  2:135767‑M1/119‑1 (MQ=255)

                                                                                                                      tCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagat                       <  1:104332‑M2/140‑53 (MQ=255)

                                                                                                                        gCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAAGGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattc                     >  2:794212‑M2/1‑86 (MQ=255)

                                                                                                                          attcgtggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGATTAGATTCCAGCAAGTTCAGATaa                   >  1:775517‑M1/18‑140 (MQ=255)

                                                                                                                           aGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtg                  <  2:636379‑M2/140‑58 (MQ=255)

                                                                                                                            gAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtgg                 >  1:1056408‑M2/1‑82 (MQ=255)

                                                                                                                             aaCGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggt                <  2:1215991‑M2/140‑60 (MQ=255)

                                                                                                                             aaCGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAA‑TGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtc               >  1:237695‑M2/1‑80 (MQ=255)

                                                                                                                               tggtcagcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGATTAGATTCCAGCAAGTTCAGATAATGAcc              <  1:378506‑M1/128‑1 (MQ=255)

                                                                                                                               cGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtca              >  2:630978‑M2/1‑79 (MQ=255)

                                                                                                                                    agcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGATTAGATTCCAGCAAGTTCAGATAATGACCGAAAt         <  2:742455‑M1/133‑1 (MQ=255)

                                                                                                                                    agcgaatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGATTAGATTCCAGCAAGTTCAGATAATGACCGAAAt         <  1:101729‑M1/133‑1 (MQ=255)

                                                                                                                                       tgcgtgATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaattg      <  1:1291204‑M2/140‑70 (MQ=255)

                                                                                                                                        aatTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGATTAGATTCCAGCAAGTTCAGATAATGACCGAAATCCGt     >  1:241508‑M1/4‑140 (MQ=255)

                                                                                                                                           tgATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATtgatccgcgagcagagggaaatgatgtgcctcacggaaaaatgccgtcagattcgtggtcagcgaattgataa  <  2:808583‑M2/140‑74 (MQ=255)

GATATCACTGGCAAACACTTTCCAGCGTCCGGGCGCGGTGCCCAATGTGTCAGCCAGCGTCATCGCAATGCTGTACGGCTCTTCGCCGGTCGAAGCCGCCGCGCTCCATACGCGATACTCGCCAGAACGGCGACGTGCGTGATCCGCGAGCAGAGGGAAATGATGTGCCTCACGGAAAAATGCCGTCAGATTCGTGGTCAGCGAATTGATAAACGCCTGCCACTCACCGCTGTGCTGATTAGATTCCAGCAAGTTCAGATAATGACCGAAATCCGTCAG  >  NC_000913/1968900‑1969178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.