BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3195519	121 (1.050)	3 (0.030)	3/276	9.6	2.3%	coding (1235/1434 nt)	rfaE	fused heptose 7‑phosphate kinase/heptose 1‑phosphate adenyltransferase
*	?	NC_000913	= 3195588	138 (1.200)	3 (0.030)	3/276	9.6	2.3%	coding (1166/1434 nt)	rfaE	fused heptose 7‑phosphate kinase/heptose 1‑phosphate adenyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 138 total aligned reads displayed.

AGTCGCCGCCTTTCACCAGCAGATCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGACACCGTTGGTCAT  >  NC_000913/3195451‑3195724

aGTCGCCGCCTTTCACCAGCAGATCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACcggg                                                                                                                                        <  2:780174/140‑1 (MQ=255)

    gccgccTTTCACCAGCAGATCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACcgggcggg                                                                                                                                    >  1:584264/1‑140 (MQ=255)

    gccgccTTTCACCAGCAGATCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACcgggcggg                                                                                                                                    >  1:852751/1‑140 (MQ=255)

    gccgccTTTCACCAGCAGATCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACcgggcggg                                                                                                                                    >  2:625138/1‑140 (MQ=255)

       gccTTTCACCAGCAGATCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAAt                                                                                                                                 <  2:952871/140‑1 (MQ=255)

                cagcagATCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTGCCCAGTCGACCGCTTCCAGTGTGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCa                                                                                                                        >  2:1148336/1‑140 (MQ=255)

                  gcagATCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGc                                                                                                                      >  1:994686/1‑140 (MQ=255)

                   cagATCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGcc                                                                                                                     >  2:1677972/1‑140 (MQ=255)

                   cagATCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGcc                                                                                                                     >  1:128805/1‑140 (MQ=255)

                   cagATCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGcc                                                                                                                     >  1:1850622/1‑140 (MQ=255)

                      aTCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGtt                                                                                                                  >  1:1014861/1‑140 (MQ=255)

                      aTCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGt                                                                                                                   >  1:1045968/1‑139 (MQ=255)

                             aaGATCCCGGCGATCAAGCGCTGTGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGa                                                                                                           <  1:461315/140‑1 (MQ=255)

                                aTCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGt                                                                                                                   >  2:1669389/1‑129 (MQ=255)

                                aTCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGt                                                                                                                   <  1:1669389/129‑1 (MQ=255)

                                 tCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCa                                                                                                       >  2:31267/1‑140 (MQ=255)

                                  cccGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCAt                                                                                                      <  1:136149/140‑1 (MQ=255)

                                  cccGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCAt                                                                                                      >  1:920385/1‑140 (MQ=255)

                                     ggCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGc                                                                                                   >  2:1361852/1‑140 (MQ=255)

                                     ggCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGc                                                                                                   >  1:1145164/1‑140 (MQ=255)

                                         aTCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGtt                                                                                               >  1:698265/1‑140 (MQ=255)

                                               cgcTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGc                                                                                         <  2:1014861/140‑1 (MQ=255)

                                                    cggcgTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGcaacaa                                                                                    >  1:1517946/1‑140 (MQ=255)

                                                    cggcgTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGcaacaa                                                                                    >  2:365839/1‑140 (MQ=255)

                                                    cggcgTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGcaacaa                                                                                    >  1:1958177/1‑140 (MQ=255)

                                                    cggcgTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGcaacaa                                                                                    >  1:417380/1‑140 (MQ=255)

                                                         tgtCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGc                                                                                         <  2:1567888/130‑1 (MQ=255)

                                                         tgtCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGc                                                                                         >  1:1567888/1‑130 (MQ=255)

                                                          gtCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGc                                                                              <  1:1887926/140‑1 (MQ=255)

                                                             ctctTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGt                                                                           <  2:1778817/140‑1 (MQ=255)

                                                                ttCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCAc                                                                        >  2:1312849/1‑140 (MQ=255)

                                                                ttCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCAc                                                                        >  1:1641000/1‑140 (MQ=255)

                                                                   aaaCGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCa                                                                     <  2:698265/140‑1 (MQ=255)

                                                                     aCGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGc                                                                   >  1:61450/1‑140 (MQ=255)

                                                                          acTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCg                                                              >  1:152370/1‑140 (MQ=255)

                                                                          acTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCg                                                              >  2:1834839/1‑140 (MQ=255)

                                                                          acTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCg                                                              >  1:215174/1‑140 (MQ=255)

                                                                          acTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCg                                                              >  1:1646114/1‑140 (MQ=255)

                                                                          acTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCg                                                              >  2:1957887/1‑140 (MQ=255)

                                                                              cccAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTTTTCGAGTGGGTTTACCGGGCGGGATTCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCa                                                          <  1:955010/140‑1 (MQ=255)

                                                                              cccAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCa                                                          <  2:152370/140‑1 (MQ=255)

                                                                                  gTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTg                                                      <  2:584264/140‑1 (MQ=255)

                                                                                   tCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGc                                                     >  2:958444/1‑140 (MQ=255)

                                                                                   tCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGc                                                     <  2:1641000/140‑1 (MQ=255)

                                                                                   tCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGc                                                     <  1:785832/140‑1 (MQ=255)

                                                                                   tCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGc                                                     <  2:1413411/140‑1 (MQ=255)

                                                                                     gACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCa                                                   <  2:884906/140‑1 (MQ=255)

                                                                                      aCCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGc                                                     <  2:1823391/137‑1 (MQ=255)

                                                                                      aCCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGc                                                     >  1:1823391/1‑137 (MQ=255)

                                                                                      aCCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAg                                                  >  2:799243/1‑140 (MQ=255)

                                                                                              cAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAgaga                                          <  1:1361852/140‑1 (MQ=255)

                                                                                              cAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAgaga                                          <  1:339960/140‑1 (MQ=255)

                                                                                                 tGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGt                                       >  1:320966/1‑140 (MQ=255)

                                                                                                    gcCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGcc                                    <  2:1752177/140‑1 (MQ=255)

                                                                                                     cccAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGccc                                   >  2:1781753/1‑140 (MQ=255)

                                                                                                     cccAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGccc                                   >  2:188919/1‑140 (MQ=255)

                                                                                                     cccAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGccc                                   >  2:704184/1‑140 (MQ=255)

                                                                                                     cccAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGccc                                   >  2:837498/1‑140 (MQ=255)

                                                                                                      ccAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCg                                  <  1:1834839/140‑1 (MQ=255)

                                                                                                           acaATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTg                             <  2:320966/140‑1 (MQ=255)

                                                                                                           acaATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTg                             <  2:1850622/140‑1 (MQ=255)

                                                                                                           acaATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTg                             <  2:1517946/140‑1 (MQ=255)

                                                                                                           acaATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTg                             <  2:670555/140‑1 (MQ=255)

                                                                                                           acaATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTg                             <  1:837498/140‑1 (MQ=255)

                                                                                                             aaTCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCa                           <  1:244049/140‑1 (MQ=255)

                                                                                                               tCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAgg                         <  1:704184/140‑1 (MQ=255)

                                                                                                               tCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAgg                         <  1:1677972/140‑1 (MQ=255)

                                                                                                               tCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAgg                         <  1:1913725/140‑1 (MQ=255)

                                                                                                               tCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAgg                         <  2:1269381/140‑1 (MQ=255)

                                                                                                               tCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAgg                         <  1:799243/140‑1 (MQ=255)

                                                                                                               tCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAgg                         <  2:1145164/140‑1 (MQ=255)

                                                                                                               tCATACGCTGTTCGAGTGCGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGTTGGAGGCATCGCTGTTGACGGCAACAACCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAgg                         <  2:973311/140‑1 (MQ=255)

                                                                                                                    cGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGt                              >  2:986726/1‑130 (MQ=255)

                                                                                                                    cGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTc                    >  1:1218911/1‑140 (MQ=255)

                                                                                                                    cGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTc                    >  1:1616503/1‑140 (MQ=255)

                                                                                                                    cGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTc                    >  2:1877672/1‑140 (MQ=255)

                                                                                                                       tGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAgg                         <  1:920768/132‑1 (MQ=255)

                                                                                                                       tGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAgg                         >  2:920768/1‑132 (MQ=255)

                                                                                                                       tGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCaaa                 <  1:969657/140‑1 (MQ=255)

                                                                                                                         ttCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTg                             >  1:797557/1‑126 (MQ=255)

                                                                                                                         ttCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAgg                         >  2:1640615/1‑130 (MQ=255)

                                                                                                                         ttCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGa               >  2:1134678/1‑140 (MQ=255)

                                                                                                                         ttCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGa               <  2:969504/140‑1 (MQ=255)

                                                                                                                         ttCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGa               >  1:840683/1‑140 (MQ=255)

                                                                                                                         ttCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGa               >  2:1496595/1‑140 (MQ=255)

                                                                                                                         ttCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGa               >  1:969504/1‑140 (MQ=255)

                                                                                                                         ttCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGa               >  2:498351/1‑140 (MQ=255)

                                                                                                                         ttCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGa               >  2:459856/1‑140 (MQ=255)

                                                                                                                         ttCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGa               >  2:411663/1‑140 (MQ=255)

                                                                                                                          tCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGAt                       <  1:147285/131‑1 (MQ=255)

                                                                                                                           cGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAgg                         <  2:565056/128‑1 (MQ=255)

                                                                                                                           cGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAgg                         >  1:565056/1‑128 (MQ=255)

                                                                                                                              gTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGACACCg          <  2:215174/140‑1 (MQ=255)

                                                                                                                                 ggTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGACACCGTTg       <  1:173727/140‑1 (MQ=255)

                                                                                                                                 ggTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGACACCGTTg       >  1:1573128/1‑140 (MQ=255)

                                                                                                                                   tttACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGTGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGACACCGTTGGt     >  1:1230812/1‑140 (MQ=255)

                                                                                                                                   tttACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGACACCGTTGGt     <  2:1958177/140‑1 (MQ=255)

                                                                                                                                     tACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGGCACCGTTGGtca   >  2:1200068/1‑140 (MQ=255)

                                                                                                                                      aCCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGACACCGTTGGtcat  <  1:459856/140‑1 (MQ=255)

                                                                                                                                      aCCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGACACCGTTGGtcat  >  2:813213/1‑140 (MQ=255)

AGTCGCCGCCTTTCACCAGCAGATCTGGCAAGATCCCGGCGATCAAGCGCTGCGGCGTGTCCTCTTCAAACGACACTACCCAGTCGACCGCTTCCAGTGCGCCCAGCACAATCATACGCTGTTCGAGTGGGTTTACCGGGCGGGAATCCCCTTTCAGCCGTTTGGTGGAGGCATCGCTGTTGACGGCAACAATCAAGCGGTCACCCAGCTTGCGGGCATTTGCCAGATAAGAGACGTGCCCGGCGTGCAGGATGTCAAAGACACCGTTGGTCAT  >  NC_000913/3195451‑3195724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.