| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,480,678 | IS5 (+) +4 bp | coding (1496‑1499/1539 nt) | emrY ← | tripartite efflux pump membrane subunit EmrY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 96 (1.280) | 55/274 | 0.2 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2480678 = | 0 (0.000) | coding (1499/1539 nt) | emrY | tripartite efflux pump membrane subunit EmrY | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 69 (0.910) | 47/276 | 0.4 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2480681 | 0 (0.000) | coding (1496/1539 nt) | emrY | tripartite efflux pump membrane subunit EmrY | |||||
Only 100 of 163 total aligned reads displayed.
CAACGCAGCATCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATATTTATCCAT > NC_000913/2480539‑2480817 | ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc > 2:1291873‑M2/140‑140 (MQ=255)ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc > 1:1173107‑M2/140‑140 (MQ=255)ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc > 1:130679‑M2/140‑140 (MQ=255)ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaacttccccgcttattcgcaccttccc < 2:220069‑M2/1‑1 (MQ=255) agcaTCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAgga > 1:1121299‑M2/1‑137 (MQ=255) caTCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaag < 1:1027371‑M2/140‑6 (MQ=255) caTCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaag < 1:1046720‑M2/140‑6 (MQ=255) tCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggt > 1:1030858‑M2/1‑133 (MQ=255) taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAAcc > 1:250314‑M2/129‑140 (MQ=255) taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAAcc > 1:881791‑M2/129‑140 (MQ=255) taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAAcc > 1:1009774‑M2/129‑140 (MQ=255) taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAAcc > 2:1045209‑M2/129‑140 (MQ=255) cAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcg < 1:800471‑M2/140‑11 (MQ=255) cAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAgg < 1:143719‑M2/132‑3 (MQ=255) aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCgt < 1:752855‑M2/14‑1 (MQ=255) ggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCgtaag < 2:1184665‑M2/17‑1 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCgtaagt > 1:889032‑M2/123‑140 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCgtaagt < 2:889032‑M2/18‑1 (MQ=255) tttCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaag > 2:846662‑M2/1‑124 (MQ=255) tCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgtgaacaag > 1:931839‑M2/1‑122 (MQ=255) cccTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtcc > 1:1141723‑M2/1‑121 (MQ=255) cTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccct < 1:427523‑M2/140‑22 (MQ=255) cTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccct > 1:1023309‑M2/1‑119 (MQ=255) ggTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgat > 2:800471‑M2/1‑116 (MQ=255) ggTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgat > 2:1046720‑M2/1‑116 (MQ=255) gTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgata < 2:400002‑M2/140‑26 (MQ=255) taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAAt > 1:1258197‑M2/109‑140 (MQ=255) aGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatga < 1:1073889‑M2/140‑29 (MQ=255) aGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatga > 1:111322‑M2/1‑112 (MQ=255) aGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatga < 2:1231204‑M2/140‑29 (MQ=255) aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAg > 2:917345‑M2/107‑140 (MQ=255) ataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAgc < 1:161514‑M2/35‑1 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAgccgcc > 2:236022‑M2/102‑140 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAgccgcc > 2:512702‑M2/102‑140 (MQ=255) ctgcCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCATTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatg < 2:456078‑M2/140‑36 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagcggagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCa > 2:521775‑M2/101‑140 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCa > 1:157898‑M2/101‑140 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCa < 1:355282‑M2/40‑1 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCa < 2:576063‑M2/40‑1 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACg > 2:864059‑M2/97‑140 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGaaa < 2:274326‑M2/48‑1 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGaaa > 1:666527‑M2/93‑140 (MQ=255) ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGaaaa > 1:77678‑M2/92‑140 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAAt < 2:653951‑M2/50‑1 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAAt > 1:1122982‑M2/91‑140 (MQ=255) aGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga < 2:172300‑M2/140‑49 (MQ=255) aGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga < 1:443385‑M2/140‑49 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAAtctc > 2:1191339‑M2/88‑140 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCa > 1:677077‑M2/87‑140 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagcggagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTg < 1:521775‑M2/58‑1 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTg < 2:157898‑M2/58‑1 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTg < 2:49840‑M2/58‑1 (MQ=255) gATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 2:753105‑M2/140‑57 (MQ=255) aTCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa > 2:1073889‑M2/1‑83 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGaa > 2:412166‑M2/78‑140 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGaa > 2:60291‑M2/78‑140 (MQ=255) cccGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag < 2:877025‑M2/140‑61 (MQ=255) cccGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag < 1:571745‑M2/140‑61 (MQ=255) cccGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg > 1:600573‑M2/1‑80 (MQ=255) atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGa < 1:236022‑M2/68‑1 (MQ=255) gCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag < 1:695890‑M2/140‑74 (MQ=255) aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGActg < 1:512702‑M2/77‑1 (MQ=255) tataACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 2:45242‑M2/140‑76 (MQ=255) catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGActgct < 2:1009774‑M2/79‑1 (MQ=255) cccccTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggggcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa < 2:1293279‑M2/140‑81 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTa < 2:677077‑M2/85‑1 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTAttt > 2:907336‑M2/53‑140 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTAttt > 2:57688‑M2/53‑140 (MQ=255) cctTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc > 1:400002‑M2/1‑54 (MQ=255) cctTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc > 2:1173246‑M2/1‑54 (MQ=255) ttATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg < 1:265489‑M2/140‑91 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCAttatta > 2:475747‑M2/45‑140 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAAt < 1:475747‑M2/98‑1 (MQ=255) gagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAAtt < 2:264469‑M2/99‑1 (MQ=255) tcaCCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 1:45242‑M2/1‑44 (MQ=255) caCCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag < 1:285265‑M2/140‑98 (MQ=255) ccAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtga < 2:322006‑M2/140‑101 (MQ=255) gagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGa < 1:280962‑M2/108‑1 (MQ=255) gagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGa < 2:655276‑M2/108‑1 (MQ=255) cGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc < 2:349581‑M2/140‑105 (MQ=255) agaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGaa < 1:646407‑M2/109‑1 (MQ=255) agaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGaa < 2:224030‑M2/109‑1 (MQ=255) ttCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcag > 1:1108223‑M2/1‑31 (MQ=255) tCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt < 1:236993‑M2/140‑111 (MQ=255) cGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta < 1:223709‑M2/140‑112 (MQ=255) cccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGc < 2:153006‑M2/120‑1 (MQ=255) ccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCg < 2:957827‑M2/121‑1 (MQ=255) ccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCg < 1:907336‑M2/121‑1 (MQ=255) ccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCg > 1:208706‑M2/20‑140 (MQ=255) ccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCg < 1:119520‑M2/121‑1 (MQ=255) ccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCg < 1:1191996‑M2/121‑1 (MQ=255) cttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCg > 1:224585‑M2/17‑137 (MQ=255) cttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAAc > 1:113378‑M2/17‑140 (MQ=255) ggcggTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca > 1:958144‑M2/1‑19 (MQ=255) tCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggggtcatcatgagtcatcaacttaccttcgccgacagcgaattcagcagtaagcgccgtcagaccaga < 2:735922‑M2/140‑129 (MQ=255) accttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATAtt < 1:57688‑M2/133‑1 (MQ=255) tccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATATTTa > 2:778641‑M2/4‑138 (MQ=255) tccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATATTTATc > 1:646648‑M2/4‑140 (MQ=255) ccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATATTTATcc > 2:406862‑M2/3‑140 (MQ=255) cAAAggaaagtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagat < 2:105885‑M2/140‑137 (MQ=255) | CAACGCAGCATCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATATTTATCCAT > NC_000913/2480539‑2480817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |