| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,480,678 | IS5 (+) +4 bp | coding (1496‑1499/1539 nt) | emrY ← | tripartite efflux pump membrane subunit EmrY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 96 (1.280) | 55/274 | 0.2 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2480678 = | 0 (0.000) | coding (1499/1539 nt) | emrY | tripartite efflux pump membrane subunit EmrY | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 69 (0.910) | 47/276 | 0.4 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2480681 | 0 (0.000) | coding (1496/1539 nt) | emrY | tripartite efflux pump membrane subunit EmrY | |||||
Only 100 of 160 total aligned reads displayed.
GCAGCATCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATATTTATCCATAAT > NC_000913/2480543‑2480820 | aacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccaaac > 2:498437‑M2/136‑140 (MQ=255) agcaTCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAgga > 1:1121299‑M2/1‑137 (MQ=255) caTCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaag < 1:1027371‑M2/140‑6 (MQ=255) caTCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaag < 1:1046720‑M2/140‑6 (MQ=255) tCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggt > 1:1030858‑M2/1‑133 (MQ=255) tCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggt > 2:402818‑M2/1‑133 (MQ=255) taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAAcc > 1:1009774‑M2/129‑140 (MQ=255) taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAAcc > 2:1045209‑M2/129‑140 (MQ=255) taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAAcc > 2:635832‑M2/129‑140 (MQ=255) cAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAgg < 1:143719‑M2/132‑3 (MQ=255) cAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAgg > 2:143719‑M2/1‑130 (MQ=255) tCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaac < 2:455771‑M2/140‑14 (MQ=255) ggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCgtaag < 2:1184665‑M2/17‑1 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCgtaagt < 2:889032‑M2/18‑1 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCgtaagt < 1:972321‑M2/18‑1 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCgtaagt > 1:889032‑M2/123‑140 (MQ=255) cTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaa < 1:1115714‑M2/140‑16 (MQ=255) tttCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaag > 2:846662‑M2/1‑124 (MQ=255) tCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgtgaacaag > 1:931839‑M2/1‑122 (MQ=255) cccTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtcc > 2:813991‑M2/1‑121 (MQ=255) cccTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtcc > 1:1141723‑M2/1‑121 (MQ=255) cTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccct > 1:1023309‑M2/1‑119 (MQ=255) cTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccct < 1:427523‑M2/140‑22 (MQ=255) tGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatat > 1:455771‑M2/1‑114 (MQ=255) taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAAt > 1:1258197‑M2/109‑140 (MQ=255) aGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatga < 1:1073889‑M2/140‑29 (MQ=255) aGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatga < 2:1231204‑M2/140‑29 (MQ=255) aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAg > 2:917345‑M2/107‑140 (MQ=255) aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAg > 1:23657‑M2/107‑140 (MQ=255) ataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAgc < 1:161514‑M2/35‑1 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAgccgcc > 2:355282‑M2/102‑140 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAgccgcc > 2:512702‑M2/102‑140 (MQ=255) ctgcCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCATTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatg < 2:456078‑M2/140‑36 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCa < 2:881791‑M2/40‑1 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCa < 2:576063‑M2/40‑1 (MQ=255) gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATa > 1:222855‑M2/99‑140 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACg > 2:864059‑M2/97‑140 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACg > 1:892673‑M2/97‑140 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACg > 1:667860‑M2/97‑140 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACg > 1:653951‑M2/97‑140 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGaaa < 2:274326‑M2/48‑1 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGaaa < 1:434631‑M2/48‑1 (MQ=255) ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGaaaa > 1:77678‑M2/92‑140 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAAt < 2:653951‑M2/50‑1 (MQ=255) cAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg > 1:568305‑M2/1‑93 (MQ=255) aGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga < 1:48690‑M2/140‑49 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAAtctc > 2:1191339‑M2/88‑140 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAAtctc > 1:919707‑M2/88‑140 (MQ=255) ttAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca > 1:225342‑M2/1‑88 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagcggagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTg < 1:521775‑M2/58‑1 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTg < 2:157898‑M2/58‑1 (MQ=255) gATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 1:1127440‑M2/140‑57 (MQ=255) tCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac > 1:1170996‑M2/1‑82 (MQ=255) gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGa < 1:296353‑M2/62‑1 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGaa > 2:412166‑M2/78‑140 (MQ=255) cccGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag < 1:571745‑M2/140‑61 (MQ=255) cccGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 2:600573‑M2/127‑48 (MQ=255) aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAAt < 1:857752‑M2/65‑1 (MQ=255) cGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:599670‑M2/140‑63 (MQ=255) aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAg < 1:635832‑M2/67‑1 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGt < 2:1024038‑M2/72‑1 (MQ=255) cGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 2:443385‑M2/1‑68 (MQ=255) gCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag < 1:695890‑M2/140‑74 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGActgc < 2:667860‑M2/78‑1 (MQ=255) tataACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc > 2:48937‑M2/1‑65 (MQ=255) tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTgg > 1:153006‑M2/60‑140 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTa < 2:677077‑M2/85‑1 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTAttt > 2:907336‑M2/53‑140 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTAttt > 1:264469‑M2/53‑140 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCa < 2:1289079‑M2/90‑1 (MQ=255) cctTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc > 1:400002‑M2/1‑54 (MQ=255) tcaCCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 1:45242‑M2/1‑44 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTaa > 1:71150‑M2/35‑131 (MQ=255) aCGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt > 2:285265‑M2/1‑37 (MQ=255) gagaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGa < 1:280962‑M2/108‑1 (MQ=255) cGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc < 2:349581‑M2/140‑105 (MQ=255) cGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggggcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc < 2:1052370‑M2/140‑105 (MQ=255) agaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGaa < 2:224030‑M2/109‑1 (MQ=255) gaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAAc > 2:166924‑M2/31‑140 (MQ=255) gaagaatttccccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAAc > 1:280300‑M2/31‑140 (MQ=255) ttCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcag > 1:1108223‑M2/1‑31 (MQ=255) tCGCTGTAAACGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt < 1:236993‑M2/140‑111 (MQ=255) ccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCg < 2:957827‑M2/121‑1 (MQ=255) ccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCg < 1:1191996‑M2/121‑1 (MQ=255) ccgcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCg < 1:119520‑M2/121‑1 (MQ=255) gcttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGaa < 2:77678‑M2/123‑1 (MQ=255) aCGGCGGTTTCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt > 2:1127440‑M2/1‑21 (MQ=255) cttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCg < 2:224585‑M2/121‑1 (MQ=255) cttattcgcaccttccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCg > 1:224585‑M2/17‑137 (MQ=255) tCGCAAACCAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggggtcatcatgagtcatcaacttaccttcgccgacagcgaattcagcagtaagcgccgtcagaccaga < 2:735922‑M2/140‑129 (MQ=255) tccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATATTTa > 2:778641‑M2/4‑138 (MQ=255) tccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATATTTa < 1:778641‑M2/135‑1 (MQ=255) tccCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATATTTATc > 1:646648‑M2/4‑140 (MQ=255) ccAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga > 2:571745‑M2/1‑5 (MQ=255) ccAAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga > 1:172300‑M2/1‑5 (MQ=255) cCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATATTTATCCa < 2:23657‑M2/139‑1 (MQ=255) cAAAggaaagtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagat < 2:105885‑M2/140‑137 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt > 1:54656‑M2/1‑2 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt < 1:316139‑M2/140‑139 (MQ=255) accaaaACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATATTTATCCATAAt > 1:629032/1‑140 (MQ=255) | GCAGCATCGCAATCCTTTCCCTGGGTGAGCGATGCTGCCGATGGCGCAGACTTAAGATCCCCGGTCTTACCCGCTATAACCCCCTCCTTTTATCATCACCCAACGCCTTTCGCTGTAAACGGCGGTTTCGCAAACCAAACCAAAACCGTAAGTAAGATAAAAGCAATAGCCGCCATACGGAAAATCTCATTTGCAGAAATAGAAAGTGACTGCTGGGTTATTTCATTATTAATTTCATTAAGAACTCCTGAAAGCGAACCATAATATTTATCCATAAT > NC_000913/2480543‑2480820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |