| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,020,352 | Δ10 bp | intergenic (‑299/+49) | ompA ← / ← sulA | outer membrane porin A/cell division inhibitor SulA |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1020352 | 1020361 | 10 | 38 [0] | [0] 39 | ompA/sulA | outer membrane porin A/cell division inhibitor SulA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1020351 | 0 (0.000) | 38 (0.920) | 28/276 | 0.4 | 100% | intergenic (‑298/+59) | ompA/sulA | outer membrane porin A/cell division inhibitor SulA |
| ? | NC_000913 | 1020362 = | 0 (0.000) | intergenic (‑309/+48) | ompA/sulA | outer membrane porin A/cell division inhibitor SulA | |||||
GAACTCCGTCAGGCATATGAAAAAAAAGTCTTGTATAAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCACGACTGAAAGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGTCTCGTGGCGTGAGAGGATGCGCTT > NC_000913/1020226‑1020476 | gAACTCCGTCAGGCATATGAAAAAAAAGTCTTGTATAAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcg > 1:432934‑M1/1‑126 (MQ=255) aCTCCGTCAGGCATATGAAAAAAAAGTCTTGTATAAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgac > 2:418071‑M1/1‑124 (MQ=255) cGTCAGGCATATGAAAAAAAAGTCTTGTATAAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaa > 1:470155‑M1/1‑120 (MQ=255) cGTCAGGCATATGAAAAAAAAGTCTTGTATAAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgca < 2:693542‑M1/123‑4 (MQ=255) cGTCAGGCATATGAAAAAAAAGTCTTGTATAAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgca > 1:693542‑M1/1‑120 (MQ=255) tCAGGCATATGAAAAAAAAGTCTTGTATAAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaa < 2:470155‑M1/140‑23 (MQ=255) tCAGGCATATGAAAAAAAAGTCTTGTATAAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaa > 1:399233‑M1/1‑118 (MQ=255) aaGTCTTGTATAAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcc < 2:399233‑M1/140‑40 (MQ=255) tataAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaattta < 2:432934‑M1/140‑48 (MQ=255) tataAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaattta < 1:216098‑M1/140‑48 (MQ=255) ggTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCTCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaa > 1:285612‑M1/1‑88 (MQ=255) ggTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaa < 1:418071‑M1/140‑53 (MQ=255) tGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCTCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgat < 2:285612‑M1/140‑57 (MQ=255) tGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgat > 2:310954‑M1/1‑84 (MQ=255) gTTTAATCTTTTTTGTCAGCGACACTTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgata > 2:444083‑M1/1‑83 (MQ=255) gTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgata > 2:574852‑M1/1‑83 (MQ=255) gTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgata > 2:63052‑M1/1‑83 (MQ=255) gTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgata > 2:285486‑M1/1‑83 (MQ=255) gTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgata > 2:254195‑M1/1‑83 (MQ=255) aaTCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaattta > 2:427526‑M1/1‑79 (MQ=255) aaTCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaattta < 1:427526‑M1/126‑48 (MQ=255) aGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgat < 1:521457‑M1/122‑57 (MQ=255) aGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgat > 2:521457‑M1/1‑66 (MQ=255) aCAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaa < 2:687642‑M1/140‑86 (MQ=255) agaagaGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaaag > 2:625343‑M1/1‑53 (MQ=255) aagaGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaaag > 2:314572‑M1/1‑51 (MQ=255) aagaGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaaag < 1:314572‑M1/138‑88 (MQ=255) gagaATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccgga < 1:673129‑M1/133‑85 (MQ=255) gagaATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccgga > 2:673129‑M1/1‑49 (MQ=255) agaATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaaagttgtc > 2:135823‑M1/1‑48 (MQ=255) agaATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaaagttgtc > 1:539025‑M1/1‑48 (MQ=255) cgGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaaagttgtctcgtggc > 2:441637‑M1/1‑41 (MQ=255) gAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaaagttgtctcgtggcgt < 1:285486‑M1/140‑102 (MQ=255) gAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaaagttgtctcgtggcgt < 1:254195‑M1/140‑102 (MQ=255) gCCTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaaagttgtctcgtggcgtgagaggatgcgcttacc < 1:444083‑M1/140‑119 (MQ=255) cTCCGCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaaagttgtctcgtggcgtgagaggatgcgcttaccgg < 1:247806‑M1/140‑121 (MQ=255) gCAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaaagttgtctcgtggcgtgagaggatgcgcttaccggacgc > 2:579168‑M1/1‑16 (MQ=255) cAAGGAAAATTAGTCgcattggctgggcgacaaaaaaagttccaggattaatcctaaatttacttaatgatacaaattagagtgaatttttagcccggaaagttgtctcgtggcgtgagaggatgcgcttaccggacgca < 1:579168‑M1/140‑126 (MQ=255) | GAACTCCGTCAGGCATATGAAAAAAAAGTCTTGTATAAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCACGACTGAAAGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGTCTCGTGGCGTGAGAGGATGCGCTT > NC_000913/1020226‑1020476 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |