| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,020,352 | Δ10 bp | intergenic (‑299/+49) | ompA ← / ← sulA | outer membrane porin A/cell division inhibitor SulA |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1020352 | 1020361 | 10 | 38 [0] | [0] 39 | ompA/sulA | outer membrane porin A/cell division inhibitor SulA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1020351 | 0 (0.000) | 38 (0.920) | 28/276 | 0.4 | 100% | intergenic (‑298/+59) | ompA/sulA | outer membrane porin A/cell division inhibitor SulA |
| ? | NC_000913 | 1020362 = | 0 (0.000) | intergenic (‑309/+48) | ompA/sulA | outer membrane porin A/cell division inhibitor SulA | |||||
AGGCATATGAAAAAAAAGTCTTGTATAAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCACGACTGAAAGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGTCTCGTGGCGTGAGAGGATGCGCTTACCGGACGCATAATAAACCCCATAG > NC_000913/1020236‑1020501 | gaactccgtcaggcatatgaaaaaaaagtcttgtataaggtatgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCg > 1:432934‑M2/127‑140 (MQ=255) actccgtcaggcatatgaaaaaaaagtcttgtataaggtatgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGAc > 2:418071‑M2/125‑140 (MQ=255) cgtcaggcatatgaaaaaaaagtcttgtataaggtatgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCa < 2:693542‑M2/3‑1 (MQ=255) cgtcaggcatatgaaaaaaaagtcttgtataaggtatgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCa > 1:693542‑M2/121‑123 (MQ=255) cgtcaggcatatgaaaaaaaagtcttgtataaggtatgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACaaaa > 1:470155‑M2/121‑140 (MQ=255) tcaggcatatgaaaaaaaagtcttgtataaggtatgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACaaaaaa < 2:470155‑M2/22‑1 (MQ=255) tcaggcatatgaaaaaaaagtcttgtataaggtatgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACaaaaaa > 1:399233‑M2/119‑140 (MQ=255) aagtcttgtataaggtatgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATcc < 2:399233‑M2/39‑1 (MQ=255) tataaggtatgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTa < 1:216098‑M2/47‑1 (MQ=255) tataaggtatgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTa < 2:432934‑M2/47‑1 (MQ=255) ggtatgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaacctcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTaa > 1:285612‑M2/89‑140 (MQ=255) ggtatgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTaa < 1:418071‑M2/52‑1 (MQ=255) tgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaacctcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGAt < 2:285612‑M2/56‑1 (MQ=255) tgtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGAt > 2:310954‑M2/85‑140 (MQ=255) gtttaatcttttttgtcagcgacactttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATa > 2:444083‑M2/84‑140 (MQ=255) gtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATa > 2:63052‑M2/84‑140 (MQ=255) gtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATa > 2:574852‑M2/84‑140 (MQ=255) gtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATa > 2:254195‑M2/84‑140 (MQ=255) gtttaatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATa > 2:285486‑M2/84‑140 (MQ=255) aatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTa < 1:427526‑M2/47‑1 (MQ=255) aatcttttttgtcagcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTa > 2:427526‑M2/80‑126 (MQ=255) agcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGAt > 2:521457‑M2/67‑122 (MQ=255) agcgacaatttacagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGAt < 1:521457‑M2/56‑1 (MQ=255) acagaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGaa < 2:687642‑M2/85‑1 (MQ=255) agaagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAg > 2:625343‑M2/54‑140 (MQ=255) aagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAg < 1:314572‑M2/87‑1 (MQ=255) aagagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAg > 2:314572‑M2/52‑138 (MQ=255) gagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGa < 1:673129‑M2/84‑1 (MQ=255) gagaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGa > 2:673129‑M2/50‑133 (MQ=255) agaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGtc > 2:135823‑M2/49‑140 (MQ=255) agaatcgcggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGtc > 1:539025‑M2/49‑140 (MQ=255) cggaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGTCTCGTGGc > 2:441637‑M2/42‑140 (MQ=255) gaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGTCTCGTGGCGt < 1:285486‑M2/101‑1 (MQ=255) gaaaccgcttcagacaagcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGTCTCGTGGCGt < 1:254195‑M2/101‑1 (MQ=255) gcctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGTCTCGTGGCGTGAGAGGATGCGCTTAcc < 1:444083‑M2/118‑1 (MQ=255) ctccgcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGTCTCGTGGCGTGAGAGGATGCGCTTACCgg < 1:247806‑M2/120‑1 (MQ=255) gcaaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGTCTCGTGGCGTGAGAGGATGCGCTTACCGGACGc > 2:579168‑M2/17‑140 (MQ=255) caaggaaaattagtcGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGTCTCGTGGCGTGAGAGGATGCGCTTACCGGACGCa < 1:579168‑M2/125‑1 (MQ=255) gCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGTCTCGTGGCGTGAGAGGATGCGCTTACCGGACGCATAATAAACCCCATAg > 1:16116/1‑140 (MQ=255) | AGGCATATGAAAAAAAAGTCTTGTATAAGGTATGTTTAATCTTTTTTGTCAGCGACAATTTACAGAAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCACGACTGAAAGCATTGGCTGGGCGACAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTGTCTCGTGGCGTGAGAGGATGCGCTTACCGGACGCATAATAAACCCCATAG > NC_000913/1020236‑1020501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |