| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,557,484 | Δ12 bp | coding (544‑555/927 nt) | ddpF ← | putative D,D‑dipeptide ABC transporter ATP‑binding subunit DdpF |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1557484 | 1557495 | 12 | 48 [0] | [0] 48 | ddpF | putative D,D‑dipeptide ABC transporter ATP‑binding subunit DdpF |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1557483 | 0 (0.000) | 48 (0.720) | 35/276 | 0.7 | 100% | coding (556/927 nt) | ddpF | putative D,D‑dipeptide ABC transporter ATP‑binding subunit DdpF |
| ? | NC_000913 | 1557496 = | 0 (0.000) | coding (543/927 nt) | ddpF | putative D,D‑dipeptide ABC transporter ATP‑binding subunit DdpF | |||||
ACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGG > NC_000913/1557350‑1557621 | ccctGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctg < 2:909494‑M1/139‑7 (MQ=255) ctgctgCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcg > 1:781390‑M1/1‑132 (MQ=255) cgTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacg < 1:1092781‑M1/140‑17 (MQ=255) cgTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacg > 1:448856‑M1/1‑124 (MQ=255) tACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcg < 1:32264‑M1/140‑30 (MQ=255) cAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgca < 2:781390‑M1/140‑32 (MQ=255) tGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggt > 1:360312‑M1/1‑104 (MQ=255) tGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggt > 1:1122437‑M1/1‑104 (MQ=255) tGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggt > 2:38660‑M1/1‑104 (MQ=255) tGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggt > 1:732468‑M1/1‑104 (MQ=255) cccGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttg < 1:602117‑M1/140‑39 (MQ=255) aCATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcg < 2:1120801‑M1/123‑30 (MQ=255) aCATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcg > 1:1120801‑M1/1‑94 (MQ=255) cATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaa < 2:1060821‑M1/140‑48 (MQ=255) aTCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaag > 1:371313‑M1/1‑92 (MQ=255) aTCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaag > 1:852837‑M1/1‑92 (MQ=255) cGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaa > 1:269355‑M1/1‑87 (MQ=255) gCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaat < 2:269355‑M1/140‑55 (MQ=255) ccACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaa > 1:787331‑M1/1‑85 (MQ=255) ccACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaa < 2:787331‑M1/138‑54 (MQ=255) tCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgc < 1:972676‑M1/140‑68 (MQ=255) tatGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaa > 1:497371‑M1/1‑70 (MQ=255) tGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaaga < 2:732468‑M1/140‑73 (MQ=255) tATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtg > 2:1022689‑M1/1‑63 (MQ=255) tATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgc < 1:591147‑M1/130‑68 (MQ=255) tATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgc > 2:591147‑M1/1‑63 (MQ=255) tCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagaga > 1:670027‑M1/1‑61 (MQ=255) tCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagaga < 2:670027‑M1/135‑75 (MQ=255) agaCATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggca < 2:448856‑M1/140‑86 (MQ=255) tgtgtgAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcg > 2:976260‑M1/1‑49 (MQ=255) tgtgtgAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcg > 1:784992‑M1/1‑49 (MQ=255) tgtgtgAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcg > 1:366934‑M1/1‑49 (MQ=255) gtgAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgata < 1:38660‑M1/140‑95 (MQ=255) gAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgatacg < 2:608038‑M1/140‑97 (MQ=255) gCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgatacgttgccgc > 1:15792‑M1/1‑37 (MQ=255) aTAGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgatacgttgccgctgcc > 2:512111‑M1/1‑33 (MQ=255) aGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaggagagtgctctggcaatggcgatacgttgccgctgccc > 1:503864‑M1/1‑31 (MQ=255) aGGTCAGCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaggagagtgctctggcaatggcgatacgttgccgctgccc < 2:503864‑M1/139‑109 (MQ=255) cagccgtgATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagggagtgctctggcaatggcgatacgttgccgctgcccgccggg > 2:546586‑M1/4‑26 (MQ=255) gCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgatacgttgccgctgcccgccggag < 2:1122437‑M1/140‑116 (MQ=255) gCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgatacgttgccgctgcccgccggag < 1:425400‑M1/140‑116 (MQ=255) gCCCGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgatacgttgccgctgcccgccggag < 2:497371‑M1/140‑116 (MQ=255) cccGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgatacgttgccgctgcccgccggaga > 2:550640‑M1/1‑24 (MQ=255) cccGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgatacgttgccgctgcccgccggaga > 1:106210‑M1/1‑24 (MQ=255) ccGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgatacgttgccgctgcccgccggagaa > 2:612046‑M1/1‑23 (MQ=255) ccGTGATTTTCCTGTAGCGTTACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgatacgttgccgctgcccgccggagaa < 1:656715‑M1/140‑118 (MQ=255) ttACgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgatacgttgccgctgcccgccggagaacgcatgaggcaggcggtcg > 2:504405‑M1/1‑4 (MQ=255) aCgatctgcgcctgaacggagatatccagcgcagaggttggctcatcaagcacaatcacgtcaggctgcgaagagagtgctctggcaatggcgatacgttgccgctgcccgccggagaacgcatgaggcaggcggtcgag > 1:1045472‑M1/1‑2 (MQ=255) | ACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGG > NC_000913/1557350‑1557621 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |