| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,557,484 | Δ12 bp | coding (544‑555/927 nt) | ddpF ← | putative D,D‑dipeptide ABC transporter ATP‑binding subunit DdpF |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1557484 | 1557495 | 12 | 48 [0] | [0] 48 | ddpF | putative D,D‑dipeptide ABC transporter ATP‑binding subunit DdpF |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1557483 | 0 (0.000) | 48 (0.720) | 35/276 | 0.7 | 100% | coding (556/927 nt) | ddpF | putative D,D‑dipeptide ABC transporter ATP‑binding subunit DdpF |
| ? | NC_000913 | 1557496 = | 0 (0.000) | coding (543/927 nt) | ddpF | putative D,D‑dipeptide ABC transporter ATP‑binding subunit DdpF | |||||
TCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAG > NC_000913/1557362‑1557633 | ccctgctgcgcgtcgcccagttctacaatctgcccgagatacatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTg < 2:909494‑M2/6‑1 (MQ=255) ctgctgcgcgtcgcccagttctacaatctgcccgagatacatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTgcg > 1:781390‑M2/133‑140 (MQ=255) cgtcgcccagttctacaatctgcccgagatacatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACg < 1:1092781‑M2/16‑1 (MQ=255) cgtcgcccagttctacaatctgcccgagatacatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACg > 1:448856‑M2/125‑140 (MQ=255) tacaatctgcccgagatacatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAgcg < 1:32264‑M2/29‑1 (MQ=255) caatctgcccgagatacatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCa < 2:781390‑M2/31‑1 (MQ=255) tgcccgagatacatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGt > 1:360312‑M2/105‑140 (MQ=255) tgcccgagatacatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGt > 1:1122437‑M2/105‑140 (MQ=255) tgcccgagatacatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGt > 2:38660‑M2/105‑140 (MQ=255) tgcccgagatacatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGt > 1:732468‑M2/105‑140 (MQ=255) cccgagatacatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTg < 1:602117‑M2/38‑1 (MQ=255) acatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAgcg < 2:1120801‑M2/29‑1 (MQ=255) acatcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAgcg > 1:1120801‑M2/95‑123 (MQ=255) catcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCaa < 2:1060821‑M2/47‑1 (MQ=255) atcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAg > 1:371313‑M2/93‑140 (MQ=255) atcaccgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAg > 1:852837‑M2/93‑140 (MQ=255) cgccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACaa > 1:269355‑M2/88‑140 (MQ=255) gccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAAt < 2:269355‑M2/54‑1 (MQ=255) ccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACaa > 1:787331‑M2/86‑138 (MQ=255) ccacccgatcgctcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACaa < 2:787331‑M2/53‑1 (MQ=255) tcatatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGc < 1:972676‑M2/67‑1 (MQ=255) tatgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGaa > 1:497371‑M2/71‑140 (MQ=255) tgacgtatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAaga < 2:732468‑M2/72‑1 (MQ=255) tatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGc < 1:591147‑M2/67‑1 (MQ=255) tatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGc > 2:591147‑M2/64‑130 (MQ=255) tatcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTg > 2:1022689‑M2/64‑140 (MQ=255) tcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAagaga > 1:670027‑M2/62‑135 (MQ=255) tcaccgagacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAagaga < 2:670027‑M2/74‑1 (MQ=255) agacattgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCa < 2:448856‑M2/85‑1 (MQ=255) tgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCg > 2:976260‑M2/50‑140 (MQ=255) tgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCg > 1:784992‑M2/50‑140 (MQ=255) tgtgtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCg > 1:366934‑M2/50‑140 (MQ=255) gtgaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATa < 1:38660‑M2/94‑1 (MQ=255) gaaatcagcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACg < 2:608038‑M2/96‑1 (MQ=255) gcacataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGc > 1:15792‑M2/38‑140 (MQ=255) ataggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGcc > 2:512111‑M2/34‑140 (MQ=255) aggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAGGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGccc > 1:503864‑M2/32‑139 (MQ=255) aggtcagcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAGGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGccc < 2:503864‑M2/108‑1 (MQ=255) cagccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGGGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCcggg > 2:546586‑M2/27‑139 (MQ=255) gcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGgag < 2:1122437‑M2/115‑1 (MQ=255) gcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGgag < 1:425400‑M2/115‑1 (MQ=255) gcccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGgag < 2:497371‑M2/115‑1 (MQ=255) cccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGgaga > 2:550640‑M2/25‑140 (MQ=255) cccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGgaga > 1:106210‑M2/25‑140 (MQ=255) ccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGaa > 2:612046‑M2/24‑140 (MQ=255) ccgtgattttcctgtagcgttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGaa < 1:656715‑M2/117‑1 (MQ=255) ttacGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCg > 2:504405‑M2/5‑140 (MQ=255) acGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCgag > 1:1045472‑M2/3‑140 (MQ=255) | TCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAG > NC_000913/1557362‑1557633 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |