| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,472,706 | Δ78 bp | pseudogene (2188‑2265/3495 nt) | ydbA → | putative outer membrane protein, N‑terminal fragment |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1472706 | 1472783 | 78 | 50 [0] | [0] 50 | ydbA | putative outer membrane protein, N‑terminal fragment |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1472705 | 0 (0.000) | 46 (0.830) | 32/256 | 0.5 | 100% | pseudogene (2187/3495 nt) | ydbA | putative outer membrane protein, N‑terminal fragment |
| ? | NC_000913 | 1472784 = | 0 (0.000) | pseudogene (2266/3495 nt) | ydbA | putative outer membrane protein, N‑terminal fragment | |||||
TCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGA > NC_000913/1472569‑1472842 | tCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggc > 2:374689‑M1/1‑137 (MQ=255)tCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggc > 2:604665‑M1/1‑137 (MQ=255) aTGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtg < 1:426430‑M1/140‑7 (MQ=255) aTGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtg < 1:437394‑M1/140‑7 (MQ=255) aTGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacac > 2:302773‑M1/1‑123 (MQ=255) aTGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagatt < 2:765274‑M1/135‑13 (MQ=255) aTGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagatt > 1:765274‑M1/1‑123 (MQ=255) aacaacGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttac < 1:404233‑M1/140‑27 (MQ=255) aacGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgc < 2:385872‑M1/140‑30 (MQ=255) ggaataGCAGCGAAGTGCATTATGGCGACTATACGATGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGACGTGATCAGGCTGGAGGCAGCATGAACggcgtggaaattaacacgggctttaccgctggg > 2:549451‑M1/3‑107 (MQ=255) aTAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacg < 1:839674‑M1/140‑37 (MQ=255) aTAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacg < 1:774906‑M1/140‑37 (MQ=255) gcGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggc < 2:97845‑M1/136‑39 (MQ=255) gcGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggc > 1:97845‑M1/1‑98 (MQ=255) cGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagaca > 1:526434‑M1/1‑97 (MQ=255) cGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacg > 1:694572‑M1/1‑97 (MQ=255) cGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacg < 2:694572‑M1/133‑37 (MQ=255) gACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttga < 1:549451‑M1/140‑60 (MQ=255) aCTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgat < 1:374689‑M1/140‑61 (MQ=255) taCGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacg < 1:555797‑M1/140‑65 (MQ=255) taCGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacg < 1:480165‑M1/140‑65 (MQ=255) taCGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacg < 1:738639‑M1/140‑65 (MQ=255) gCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtgg > 1:471073‑M1/1‑70 (MQ=255) tgtgCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggta < 1:604665‑M1/140‑77 (MQ=255) aTACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgac > 1:765234‑M1/1‑50 (MQ=255) ggTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctg < 1:84536‑M1/140‑95 (MQ=255) ttAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgac > 2:802138‑M1/1‑44 (MQ=255) gtgtAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgcc < 2:118037‑M1/140‑100 (MQ=255) aCGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcac > 2:314879‑M1/1‑36 (MQ=255) cGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacc > 2:816891‑M1/1‑35 (MQ=255) cGGGAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctca < 1:816891‑M1/140‑109 (MQ=255) gggAAGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaa < 2:363692‑M1/140‑110 (MQ=255) aaGTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgt < 1:878427‑M1/140‑113 (MQ=255) gTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtcc < 1:49556‑M1/140‑115 (MQ=255) gTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtcc < 1:221916‑M1/140‑115 (MQ=255) gTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtcc < 2:765234‑M1/140‑115 (MQ=255) gTGATGAGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtcc < 2:711161‑M1/140‑115 (MQ=255) tgaGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtccgtgg < 1:944993‑M1/140‑119 (MQ=255) tgaGGCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtccgtgg > 1:126277‑M1/1‑22 (MQ=255) gCTGGTGGCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtccgtggtatg > 1:567380‑M1/1‑18 (MQ=255) tggtggCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgcccgtggtatgga < 2:847956‑M1/140‑125 (MQ=255) ggtggCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtccgtggtatggac > 2:141840‑M1/1‑15 (MQ=255) tggCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtcc < 2:24417‑M1/127‑115 (MQ=255) tggCAGCATGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtcc > 1:24417‑M1/1‑13 (MQ=255) gcagcaTGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtccgtggtatggactgcc < 1:428467‑M1/140‑130 (MQ=255) gcagcaTGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtccgtggtatggactgcc < 1:302773‑M1/140‑130 (MQ=255) gcaTGAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtccgtggtatggactgccaaa > 1:493160‑M1/1‑8 (MQ=255) gAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtccgtggt < 1:717761‑M1/123‑120 (MQ=255) gAACggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtccgtggt > 2:717761‑M1/1‑4 (MQ=255) aaCggcgtggagattaacacgggctttaccgctggtacggcagacaccactgtgagttttgataacgtagtggaaggtagcaacctgaccgacgctgacgccatcacctcaacgtccgtggtatggactgccaaaggcag > 1:708428‑M1/1‑3 (MQ=255) | TCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGA > NC_000913/1472569‑1472842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |